RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 KDELC2Q7Z4H8 507 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 HTR3CQ8WXA8 447 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TSNARE1Q96NA8 513 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 BCO2Q9BYV7 579 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 LRRC4Q9HBW1 653 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 LRRC42Q9Y546 428 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RBBP6Q7Z6E9 1792 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 E7ENQ6 273 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 DCXO43602 365 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RFPL1O75677 317 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 BPGMP07738 259 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 LINGO3P0C6S8 592 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 USP4Q13107 963 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 GRM1Q13255 1194 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 ACAP1Q15027 740 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RNF148Q8N7C7 305 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 NRG4Q8WWG1 115 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 ZNF184Q99676 751 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 DHRS4Q9BTZ2 278 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 C20orf27Q9GZN8 174 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 GOLGA2P5Q9HBQ8 144 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 IGKV6D-21A0A0A0MT36 114 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 RNF103O00237 685 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 AIM2O14862 343 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 GLRBP48167 497 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 HDAC4P56524 1084 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 TRIP10Q15642 601 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 CCDC142Q17RM4 750 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 USP33Q8TEY7 942 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 AZIN2Q96A70 460 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 MOCOSQ96EN8 888 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 CXCL16Q9H2A7 254 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 MCF2P10911 925 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 TPH1P17752 444 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 NUMBP49757 651 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC30A9Q6PML9 568 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 CCNJLQ8IV13 435 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 C10orf107Q8IVU9 208 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 TBCBQ99426 244 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 OSMRQ99650 979 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 ASB7Q9H672 318 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 THAP1Q9NVV9 213 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 FETUBQ9UGM5 382 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC7A8Q9UHI5 535 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 INPP5FQ9Y2H2 1132 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 PSAT1Q9Y617 370 aa13.28□□□□□ -0.28
HMGCS1-201ENST00000325110 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 ABLIM1O14639 778 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 LGALS2P05162 132 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 CYP2C8P10632 490 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 ACADSP16219 412 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SERPINB9P50453 376 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 PGGT1BP53609 377 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 COPAP53621 1224 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC10A2Q12908 348 aaPredicted RBP13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 DEFB107AQ8IZN7 70 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SIX6OS1Q8N1H7 587 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 ZNF276Q8N554 614 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 CAB39LQ9H9S4 337 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 USP2O75604 605 aaPredicted RBP13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 ANPEPP15144 967 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SP100P23497 879 aaPredicted RBP13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 ATICP31939 592 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SERPINB5P36952 375 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 DEFB106AQ8N104 65 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SHKBP1Q8TBC3 707 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 CSPG4P5Q96PW8 444 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SETD4Q9NVD3 440 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 SOX13Q9UN79 622 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 C2CD2Q9Y426 696 aa13.27□□□□□ -0.28
HMGCS1-201ENST00000325110 M0QYT0 321 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 TGDSO95455 350 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 RALBP11234 206 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 ADCYAP1R1P41586 468 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 ADIGQ0VDE8 80 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 ENDOVQ8N8Q3 282 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 BEST2Q8NFU1 509 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 OR52K1Q8NGK4 314 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 FGD4Q96M96 766 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 STX18Q9P2W9 335 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 PPM1HQ9ULR3 514 aa13.27□□□□□ -0.29
HMGCS1-201ENST00000325110 ZBTB42B2RXF5 422 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms