RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 RAD51BO15315 384 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 TNFAIP8O95379 198 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 GLI1P08151 1106 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 YY1P25490 414 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 MYL6P60660 151 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 PHACTR4Q8IZ21 702 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 CPB2Q96IY4 423 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 ANKZF1Q9H8Y5 726 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 TSC22D2O75157 780 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 STAU1O95793 577 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 THP07101 528 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 ERVK-10P10266 1014 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 PABPC1P11940 636 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 GTF2A2P52657 109 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 EN1Q05925 392 aaPredicted RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 EZH2Q15910 746 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 MTSS1LQ765P7 747 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 CENPTQ96BT3 561 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 POP1Q99575 1024 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 CCNT2O60583 730 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 FEN1P39748 380 aaKnown RBP21.54■■□□□ 1.04
RNF40-201ENST00000324685 TKTL1P51854 596 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 GRIK3Q13003 919 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 NFIL3Q16649 462 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 NECAB2Q7Z6G3 386 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 ROGDIQ9GZN7 287 aa21.54■■□□□ 1.04
RNF40-201ENST00000324685 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 MED26O95402 600 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 PIK3R1P27986 724 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 ILDR2Q71H61 639 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 KCNMB4Q86W47 210 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 AGO4Q9HCK5 861 aaKnown RBP21.53■■□□□ 1.04
RNF40-201ENST00000324685 CCDC149Q6ZUS6 474 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 EPHX4Q8IUS5 362 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 ACTL9Q8TC94 416 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 GMCL1Q96IK5 515 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 KLHL31Q9H511 634 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 TPRKBQ9Y3C4 175 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 ERI2A8K979 691 aaKnown RBP21.53■■□□□ 1.04
RNF40-201ENST00000324685 NR2C2P49116 596 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 FASTKQ14296 549 aaKnown RBP21.53■■□□□ 1.04
RNF40-201ENST00000324685 VN1R5Q7Z5H4 357 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 UTP15Q8TED0 518 aaKnown RBP21.53■■□□□ 1.04
RNF40-201ENST00000324685 ARHGEF3Q9NR81 526 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 TRHDEQ9UKU6 1024 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 NEXMIFQ5QGS0 1516 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 AKAP3O75969 853 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 BMP10O95393 424 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 LDLRP01130 860 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 SPDYCQ5MJ68 293 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 ZNF280DQ6N043 979 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 HEATR4Q86WZ0 1026 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 PHACTR1Q9C0D0 580 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 PCDHA3Q9Y5H8 950 aa21.53■■□□□ 1.04
RNF40-201ENST00000324685 CCDC154A6NI56 674 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 H3BQF6 201 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 CNPP09543 421 aaKnown RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 TOB1P50616 345 aaPredicted RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 ZNF268Q14587 947 aaPredicted RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 TSNQ15631 228 aaKnown RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 FAM136AQ96C01 138 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 LRRC39Q96DD0 335 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 LACRTQ9GZZ8 138 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 TRPC4Q9UBN4 977 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 CNTNAP4Q9C0A0 1308 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 FCHO1O14526 889 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 YWHAQP27348 245 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 BFSP2Q13515 415 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 PDZK1Q5T2W1 519 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 FBXO39Q8N4B4 442 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 VCPIP1Q96JH7 1222 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 MROH8Q9H579 483 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 TLR8Q9NR97 1041 aaKnown RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 PHGDHO43175 533 aaKnown RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 ELK3P41970 407 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 EPHB3P54753 998 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 MARC1Q5VT66 337 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 TLK2Q86UE8 772 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 EMC1Q8N766 993 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 OR56A4Q8NGH8 313 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 ASB2Q96Q27 587 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 SEMA4AQ9H3S1 761 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 RBM22Q9NW64 420 aaKnown RBP eCLIP21.52■■□□□ 1.044e-7■■□□□ 11.6
RNF40-201ENST00000324685 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 SMIM31A0A1B0GVY4 71 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 TMEM191CA6NGB0 347 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 IFRD1O00458 451 aaPredicted RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 ASNA1O43681 348 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 ALADP13716 330 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 SERPINH1P50454 418 aaKnown RBP21.52■■□□□ 1.04
RNF40-201ENST00000324685 CDK7P50613 346 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 REPS1Q96D71 796 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 PXMP2Q9NR77 195 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 ADPRHL2Q9NX46 363 aa21.52■■□□□ 1.04
RNF40-201ENST00000324685 HACD1B0YJ81 288 aa21.52■■□□□ 1.03
RNF40-201ENST00000324685 CCR1P32246 355 aa21.52■■□□□ 1.03
RNF40-201ENST00000324685 ITGA1P56199 1179 aa21.52■■□□□ 1.03
RNF40-201ENST00000324685 SEPHS2Q99611 448 aa21.52■■□□□ 1.03
RNF40-201ENST00000324685 PIPSLA2A3N6 862 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms