RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 PRG3Q9Y2Y8 225 aaPredicted RBP20.74■□□□□ 0.91
PDZD3-201ENST00000322712 EEF2KO00418 725 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 SKIP12755 728 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 KRT15P19012 456 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 XRCC4Q13426 336 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 BSPRYQ5W0U4 402 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 HEATR6Q6AI08 1181 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 DENND5BQ6ZUT9 1274 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 C4orf33Q8N1A6 199 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 TFB1MQ8WVM0 346 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 KLC2Q9H0B6 622 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 H3BRJ5 948 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 GEMIN4P57678 1058 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 AP1B1Q10567 949 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 DPYSQ14117 519 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 TDRPQ86YL5 185 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 PSTKQ8IV42 348 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 DYDC1Q8WWB3 177 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 HTR3CQ8WXA8 447 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 TSEN34Q9BSV6 310 aaKnown RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 COLEC11Q9BWP8 271 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 DMAP1Q9NPF5 467 aaPredicted RBP20.73■□□□□ 0.91
PDZD3-201ENST00000322712 FBXW11Q9UKB1 542 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 SQORQ9Y6N5 450 aa20.73■□□□□ 0.91
PDZD3-201ENST00000322712 GCATO75600 419 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 OR1G1P47890 313 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 LIG3P49916 1009 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 YWHAGP61981 247 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDZD3-201ENST00000322712 YWHAHQ04917 246 aaPredicted RBP20.72■□□□□ 0.91
PDZD3-201ENST00000322712 CFAP36Q96G28 342 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 PHACTR1Q9C0D0 580 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 ACSS3Q9H6R3 686 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 TBC1D13Q9NVG8 400 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 NLRC5Q86WI3 1866 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 TCRBV9S1A1TA0A576 114 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 SMAPO00193 183 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 CAPN15O75808 1086 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 PHBP35232 272 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 NOMO2Q5JPE7 1267 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 ZNF534Q76KX8 674 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 VPS52Q8N1B4 723 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 RIBC1Q8N443 379 aaPredicted RBP20.72■□□□□ 0.91
PDZD3-201ENST00000322712 SLC43A3Q8NBI5 491 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 CCNYQ8ND76 341 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 UROC1Q96N76 676 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 PAFAH2Q99487 392 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 PLAC1Q9HBJ0 212 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 PIH1D1Q9NWS0 290 aaKnown RBP20.72■□□□□ 0.91
PDZD3-201ENST00000322712 SEPT10Q9P0V9 454 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 RCOR3Q9P2K3 495 aaPredicted RBP20.72■□□□□ 0.91
PDZD3-201ENST00000322712 DSEQ9UL01 958 aa20.72■□□□□ 0.91
PDZD3-201ENST00000322712 NUP205Q92621 2012 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 VIMP08670 466 aaKnown RBP20.71■□□□□ 0.91
PDZD3-201ENST00000322712 DSC1Q08554 894 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 MTFR1Q15390 333 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 PM20D1Q6GTS8 502 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 PRPF39Q86UA1 669 aaKnown RBP20.71■□□□□ 0.91
PDZD3-201ENST00000322712 TAC4Q86UU9 113 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 THEM5Q8N1Q8 247 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 MPP5Q8N3R9 675 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 P2RY11Q96G91 374 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 SEC16BQ96JE7 1060 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 TKTL2Q9H0I9 626 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 TRABDQ9H4I3 376 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 PSMC3IPQ9P2W1 217 aaPredicted RBP20.71■□□□□ 0.91
PDZD3-201ENST00000322712 HCSTQ9UBK5 93 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.71■□□□□ 0.91
PDZD3-201ENST00000322712 MRPL42Q9Y6G3 142 aaKnown RBP20.71■□□□□ 0.91
PDZD3-201ENST00000322712 PTPRDP23468 1912 aa20.71■□□□□ 0.91
PDZD3-201ENST00000322712 TET1Q8NFU7 2136 aa20.7■□□□□ 0.91
PDZD3-201ENST00000322712 C5orf60A6NFR6 353 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 DCLK1O15075 740 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 INPPL1O15357 1258 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ERCC2P18074 760 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 GATMP50440 423 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 GPNMBQ14956 572 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 KBTBD12Q3ZCT8 623 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 SLC39A12Q504Y0 691 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ANKRD20A2Q5SQ80 823 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ANKRD20A1Q5TYW2 823 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 SDHAF4Q5VUM1 108 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ANKRD20A3Q5VUR7 823 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ARHGEF18Q6ZSZ5 1173 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 COLGALT2Q8IYK4 626 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 NPWQ8N729 165 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 B3GALT6Q96L58 329 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 NUDT5Q9UKK9 219 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 NBNO60934 754 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 EOMESO95936 686 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 GRIK1P39086 918 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 TSPY1Q01534 308 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 SEMA3BQ13214 749 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 SPATS2Q86XZ4 545 aaKnown RBP20.7■□□□□ 0.9
PDZD3-201ENST00000322712 DEFB118Q96PH6 123 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 WDCPQ9H6R7 721 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 SLC24A2Q9UI40 661 aa20.7■□□□□ 0.9
PDZD3-201ENST00000322712 ATXN2Q99700 1313 aaKnown RBP20.69■□□□□ 0.9
PDZD3-201ENST00000322712 TCP11X1B4DZS4 312 aa20.69■□□□□ 0.9
PDZD3-201ENST00000322712 KCNK1O00180 336 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms