RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 CACNA1IQ9P0X4 2223 aa19.44■□□□□ 0.7
CIRBP-201ENST00000320936 ITIH6Q6UXX5 1313 aa19.44■□□□□ 0.7
CIRBP-201ENST00000320936 TYW5A2RUC4 315 aaKnown RBP19.43■□□□□ 0.7
CIRBP-201ENST00000320936 TBC1D3BA6NDS4 549 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 IGLV3-25P01717 112 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 GYPCP04921 128 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 TPM1P09493 284 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 SLC2A3P11169 496 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 ABCB4P21439 1286 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 CCR1P32246 355 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 DGKGP49619 791 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 CSTF1Q05048 431 aaKnown RBP19.43■□□□□ 0.7
CIRBP-201ENST00000320936 MESP2Q0VG99 397 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 MPPE1Q53F39 396 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 C2orf27AQ580R0 203 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 C10orf76Q5T2E6 689 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 SPECC1LQ69YQ0 1117 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 RFWD3Q6PCD5 774 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 PHF13Q86YI8 300 aaPredicted RBP19.43■□□□□ 0.7
CIRBP-201ENST00000320936 SFTPA1Q8IWL2 248 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 FAM217AQ8IXS0 508 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 SPEM1Q8N4L4 309 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 ATP6V0D2Q8N8Y2 350 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 RPLP0P6Q8NHW5 317 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 ATOH1Q92858 354 aaPredicted RBP19.43■□□□□ 0.7
CIRBP-201ENST00000320936 SLC39A13Q96H72 371 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 IRF2BPLQ9H1B7 796 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 CAPN11Q9UMQ6 739 aa19.43■□□□□ 0.7
CIRBP-201ENST00000320936 GOLGA6L7A0A1B0GV03 622 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 TRIM24O15164 1050 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 ATG13O75143 517 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 PENKP01210 267 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-201ENST00000320936 CASP14P31944 242 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 FLT3P36888 993 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 CXCL12P48061 93 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 SATB1Q01826 763 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 GAS6Q14393 721 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 FYB2Q5VWT5 728 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 DNAJC24Q6P3W2 148 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 ZNF571Q7Z3V5 609 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-201ENST00000320936 VPS36Q86VN1 386 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 CHSY1Q86X52 802 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 EMC1Q8N766 993 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 TERB1Q8NA31 727 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 EZH1Q92800 747 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-201ENST00000320936 TMA16Q96EY4 203 aaKnown RBP19.42■□□□□ 0.7
CIRBP-201ENST00000320936 BTN2A3PQ96KV6 586 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 SELENOOQ9BVL4 669 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 TRIM5Q9C035 493 aa19.42■□□□□ 0.7
CIRBP-201ENST00000320936 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.42■□□□□ 0.7
CIRBP-201ENST00000320936 ANKRD62A6NC57 917 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 K7EQS6 105 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 TBL1XO60907 577 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 GJB6O95452 261 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 SLC6A4P31645 630 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 PRKCIP41743 596 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 DEUP1Q05D60 604 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 C1QBPQ07021 282 aaKnown RBP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 TRIM14Q14142 442 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 SLC25A52Q3SY17 297 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 FAM133BQ5BKY9 247 aaKnown RBP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 NADSYN1Q6IA69 706 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 ACAD10Q6JQN1 1059 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 PPP1R2P3Q6NXS1 205 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 PKN3Q6P5Z2 889 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 TSSK4Q6SA08 328 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 MON1BQ7L1V2 547 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 HJURPQ8NCD3 748 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 SYN2Q92777 582 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 AZIN2Q96A70 460 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 ACDQ96AP0 544 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 CFAP57Q96MR6 1250 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 TBCBQ99426 244 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 FAM86C1Q9NVL1 165 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 STIM2Q9P246 746 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 XPO7Q9UIA9 1087 aaKnown RBP19.41■□□□□ 0.7
CIRBP-201ENST00000320936 STOML2Q9UJZ1 356 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 PAXBP1Q9Y5B6 917 aa19.41■□□□□ 0.7
CIRBP-201ENST00000320936 KRT3P12035 628 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 TFE3P19532 575 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-201ENST00000320936 TIE1P35590 1138 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 ATP11AP98196 1134 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 CDO1Q16878 200 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 VSTM4Q8IW00 320 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 CCDC117Q8IWD4 279 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-201ENST00000320936 LGI2Q8N0V4 545 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 PHTF2Q8N3S3 785 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 NPY6RQ99463 290 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 SYT11Q9BT88 431 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 RBSNQ9H1K0 784 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 PRMT8Q9NR22 394 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-201ENST00000320936 PIGVQ9NUD9 493 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 TAS2R14Q9NYV8 317 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 TMEM59LQ9UK28 342 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 FBXO4Q9UKT5 387 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 SLC8A2Q9UPR5 921 aa19.4■□□□□ 0.7
CIRBP-201ENST00000320936 BZW2Q9Y6E2 419 aaKnown RBP19.4■□□□□ 0.7
CIRBP-201ENST00000320936 CACNA1HO95180 2353 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms