RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 RPL10AP62906 217 aaKnown RBP17.97■□□□□ 0.47
COL9A1-201ENST00000320755 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
COL9A1-201ENST00000320755 SLC26A9Q7LBE3 791 aa17.97■□□□□ 0.47
COL9A1-201ENST00000320755 NT5DC4Q86YG4 428 aa17.97■□□□□ 0.47
COL9A1-201ENST00000320755 ADAM32Q8TC27 787 aa17.97■□□□□ 0.47
COL9A1-201ENST00000320755 DYNC1LI2O43237 492 aaPredicted RBP17.96■□□□□ 0.47
COL9A1-201ENST00000320755 MFSD11O43934 449 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 STAU1O95793 577 aaKnown RBP17.96■□□□□ 0.47
COL9A1-201ENST00000320755 SETSIPP0DME0 302 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 BCAT1P54687 386 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 DCAF4L1Q3SXM0 396 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 CRLF3Q8IUI8 442 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 KBTBD7Q8WVZ9 684 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 EBF4Q9BQW3 602 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 PCDHA11Q9Y5I1 949 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 FAM159BA6NKW6 160 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 KCNK1O00180 336 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 USP12O75317 370 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 TKTP29401 623 aaKnown RBP17.96■□□□□ 0.47
COL9A1-201ENST00000320755 PGM1P36871 562 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 PDE1BQ01064 536 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 SNAPC2Q13487 334 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 ACSBG2Q5FVE4 666 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 FBXO41Q8TF61 875 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
COL9A1-201ENST00000320755 PSAT1Q9Y617 370 aa17.96■□□□□ 0.47
COL9A1-201ENST00000320755 MMP3P08254 477 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PTPN9P43378 593 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 CCNA1P78396 465 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 MXRA7P84157 204 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 STX3Q13277 289 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 NOTUMQ6P988 496 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PIGZQ86VD9 579 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 TEX9Q8N6V9 391 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PGBD4Q96DM1 585 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 CLPTM1LQ96KA5 538 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 FAM161BQ96MY7 647 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 XAB2Q9HCS7 855 aaKnown RBP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 SMIM28A0A1B0GU29 152 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 RNF103O00237 685 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PDHXO00330 501 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ZFXP17010 805 aaPredicted RBP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PAX7P23759 505 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 IGFBP6P24592 240 aaPredicted RBP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 MLH1P40692 756 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 SARNPP82979 210 aaKnown RBP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PPM1JQ5JR12 505 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 DNAJB3Q8WWF6 145 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 TLE6Q9H808 572 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 DCLRE1BQ9H816 532 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PLEKHA5Q9HAU0 1116 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 SUFUQ9UMX1 484 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ADCY6O43306 1168 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ERVK-10P10266 1014 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 PSMB4P28070 264 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 CRYMQ14894 314 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ZBTB6Q15916 424 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 DGKDQ16760 1214 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 MUM1Q2TAK8 710 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 FASTKD1Q53R41 847 aaKnown RBP17.95■□□□□ 0.46
COL9A1-201ENST00000320755 APPL2Q8NEU8 664 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 P2RY11Q96G91 374 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 TUBB6Q9BUF5 446 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ADAMTS10Q9H324 1103 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 ARHGEF4Q9NR80 690 aa17.95■□□□□ 0.46
COL9A1-201ENST00000320755 BEST1O76090 585 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 BPGMP07738 259 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 ABL2P42684 1182 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 MAGEA3P43357 314 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 MAGEA6P43360 314 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 NR2C2P49116 596 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 SLC8A3P57103 927 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 SOX4Q06945 474 aaPredicted RBP17.94■□□□□ 0.46
COL9A1-201ENST00000320755 THOC5Q13769 683 aaKnown RBP17.94■□□□□ 0.46
COL9A1-201ENST00000320755 UBAP2LQ14157 1087 aaKnown RBP17.94■□□□□ 0.46
COL9A1-201ENST00000320755 N4BP2L1Q5TBK1 243 aaPredicted RBP17.94■□□□□ 0.46
COL9A1-201ENST00000320755 ZNF410Q86VK4 478 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 UNC93AQ86WB7 457 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 ZDHHC17Q8IUH5 632 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 TRIM42Q8IWZ5 723 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 A0A0A0MRY4 1105 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 SDR42E2A6NKP2 422 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 M0QYT0 321 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 TPP1O14773 563 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 CAPN9O14815 690 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 ITM2AO43736 263 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 HNRNPCL1O60812 293 aaKnown RBP17.94■□□□□ 0.46
COL9A1-201ENST00000320755 DNAJC6O75061 913 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 CYP2C9P11712 490 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 ABCG1P45844 678 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 OCRLQ01968 901 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 SYPL2Q5VXT5 272 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 MAB21L3Q8N8X9 362 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 TMEM40Q8WWA1 233 aa17.94■□□□□ 0.46
COL9A1-201ENST00000320755 USP6NLQ92738 828 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms