RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RABEPKQ7Z6M1 372 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 SCUBE3Q8IX30 993 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 ZNF557Q8N988 423 aaPredicted RBP18.5■□□□□ 0.55
TPM1-203ENST00000317516 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 WFIKKN2Q8TEU8 576 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 AZIN2Q96A70 460 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 P2RY11Q96G91 374 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 MRGPRX1Q96LB2 322 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 DDX50Q9BQ39 737 aaKnown RBP18.5■□□□□ 0.55
TPM1-203ENST00000317516 CRACR2AQ9BSW2 395 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 LSM14BQ9BX40 385 aaKnown RBP18.5■□□□□ 0.55
TPM1-203ENST00000317516 CD248Q9HCU0 757 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 PLA2G4CQ9UP65 541 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 LNP1A1A4G5 178 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 GTPBP10A4D1E9 387 aaKnown RBP18.49■□□□□ 0.55
TPM1-203ENST00000317516 C4orf47A7E2U8 309 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 IRAK2O43187 625 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 THAP12O43422 761 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 NDUFS2O75306 463 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 CALCAP01258 141 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 ADRB1P08588 477 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 KCNA4P22459 653 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 GNA15P30679 374 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 MTIF2P46199 727 aaKnown RBP18.49■□□□□ 0.55
TPM1-203ENST00000317516 RPL34P49207 117 aaKnown RBP18.49■□□□□ 0.55
TPM1-203ENST00000317516 IRX4P78413 519 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 ENPP2Q13822 863 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 EXOC3L4Q17RC7 722 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 TRIM61Q5EBN2 209 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 MPP7Q5T2T1 576 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 KIAA1324Q6UXG2 1013 aaKnown RBP18.49■□□□□ 0.55
TPM1-203ENST00000317516 METTL3Q86U44 580 aaKnown RBP18.49■□□□□ 0.55
TPM1-203ENST00000317516 FAM114A1Q8IWE2 563 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 FAM149B1Q96BN6 582 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 SERPINB11Q96P15 392 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 MED15Q96RN5 788 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 TMEM9BQ9NQ34 198 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 DACH1Q9UI36 760 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 CLEC4EQ9ULY5 219 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 MYO16Q9Y6X6 1858 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 RALGAPA1Q6GYQ0 2036 aa18.49■□□□□ 0.55
TPM1-203ENST00000317516 IGHV1OR15-9A0A0B4J2B8 117 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 CAPN9O14815 690 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 IGLV3-27P01718 113 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 HOXD9P28356 352 aaPredicted RBP18.48■□□□□ 0.55
TPM1-203ENST00000317516 USP8P40818 1118 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 IL12RB1P42701 662 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 ZNF33AQ06730 810 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 ZNF234Q14588 700 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 BEND5Q7L4P6 421 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 CLEC4CQ8WTT0 213 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 ERLEC1Q96DZ1 483 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 CLSTN2Q9H4D0 955 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 PRDM16Q9HAZ2 1276 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 APEX2Q9UBZ4 518 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 PILRBQ9UKJ0 227 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 CYP8B1Q9UNU6 501 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 SPTBN2O15020 2390 aa18.48■□□□□ 0.55
TPM1-203ENST00000317516 ABCA7Q8IZY2 2146 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 TYW5A2RUC4 315 aaKnown RBP18.47■□□□□ 0.55
TPM1-203ENST00000317516 PATE3B3GLJ2 98 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 ACSL4O60488 711 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
TPM1-203ENST00000317516 SLC9A1P19634 815 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 ITPKAP23677 461 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 NNTQ13423 1086 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 ARHGAP44Q17R89 818 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 DUOXA1Q1HG43 343 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 FUT11Q495W5 492 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 SYCP2LQ5T4T6 812 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 PIK3R6Q5UE93 754 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 DENND1BQ6P3S1 775 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 SERPINA13PQ6UXR4 307 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 TMPRSS6Q8IU80 811 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 CCDC117Q8IWD4 279 aaPredicted RBP18.47■□□□□ 0.55
TPM1-203ENST00000317516 FOXJ1Q92949 421 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 SLC4A5Q9BY07 1137 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 THAP9Q9H5L6 903 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 TMEM74BQ9NUR3 256 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 TLR6Q9Y2C9 796 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 DNAH14Q0VDD8 3507 aa18.47■□□□□ 0.55
TPM1-203ENST00000317516 KIAA1549LQ6ZVL6 1849 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 MYO18AQ92614 2054 aaKnown RBP18.46■□□□□ 0.55
TPM1-203ENST00000317516 ATP5BP06576 529 aaKnown RBP18.46■□□□□ 0.55
TPM1-203ENST00000317516 EPHX1P07099 455 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 ACADMP11310 421 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 HLA-FP30511 346 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 OXTRP30559 389 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 SNX16P57768 344 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 SLC23A3Q6PIS1 610 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 CHST9Q7L1S5 443 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 IRF2BP1Q8IU81 584 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 AHI1Q8N157 1196 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 DEFB119Q8N690 84 aa18.46■□□□□ 0.55
TPM1-203ENST00000317516 DQX1Q8TE96 717 aaKnown RBP18.46■□□□□ 0.55
TPM1-203ENST00000317516 PRCCQ92733 491 aaPredicted RBP18.46■□□□□ 0.55
TPM1-203ENST00000317516 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms