RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 RXFP1Q9HBX9 757 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PCDH18Q9HCL0 1135 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 UBN1Q9NPG3 1134 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PIGVQ9NUD9 493 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DDX56Q9NY93 547 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 KIAA1257Q9ULG3 409 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 AP4E1Q9UPM8 1137 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 A0A0G2JND7 137 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 APRTP07741 180 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 FAM200BP0CF97 657 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 SRGAP2BP0DMP2 458 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 GRK4P32298 578 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 PNPLA4P41247 253 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 GRIA1P42261 906 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 SLC8A3P57103 927 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 CRADDP78560 199 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 TAF1BQ53T94 588 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 XKR4Q5GH76 650 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 LRRC38Q5VT99 294 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 ISLR2Q6UXK2 745 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 UNC93AQ86WB7 457 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 CCNYQ8ND76 341 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 FAM13CQ8NE31 585 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 DBF4BQ8NFT6 615 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 UCMAQ8WVF2 138 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RNF157Q96PX1 679 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 NUDCD1Q96RS6 583 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RTP3Q9BQQ7 232 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 STMN4Q9H169 189 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RAB6BQ9NRW1 208 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 ABI2Q9NYB9 513 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 DPPA5A6NC42 116 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 KCNK1O00180 336 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MCF2LO15068 1137 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MSI1O43347 362 aaKnown RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 TMEM63AO94886 807 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 UNC5CO95185 931 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 LINGO3P0C6S8 592 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MAGEA4P43358 317 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 BIRC2Q13490 618 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 DDR2Q16832 855 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 TNFAIP8L3Q5GJ75 292 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RHBDF2Q6PJF5 856 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 ASRGL1Q7L266 308 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 POLNQ7Z5Q5 900 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 SLC35B2Q8TB61 432 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MAGEC3Q8TD91 643 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 FBF1Q8TES7 1133 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 FNIP1Q8TF40 1166 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MAIP1Q8WWC4 291 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 CPT1BQ92523 772 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RNF34Q969K3 372 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 MYLPFQ96A32 169 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 RUNDC3BQ96NL0 473 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 TBC1D10AQ9BXI6 508 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 UNC93B1Q9H1C4 597 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRIM55-202ENST00000315962 WHRNQ9P202 907 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 SFMBT1Q9UHJ3 866 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 SLC27A5Q9Y2P5 690 aa7.87□□□□□ -1.15
TRIM55-202ENST00000315962 C2CD2LO14523 706 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 KPNA6O60684 536 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 PEX11AO75192 247 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 SMNDC1O75940 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 STAU1O95793 577 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 FYNP06241 537 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CCND1P24385 295 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 ADRA1DP25100 572 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 L1CAMP32004 1257 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 MRPS5P82675 430 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CLLU1OSQ5K130 101 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 MFSD5Q6N075 450 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 BBS12Q6ZW61 710 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TRMT10CQ7L0Y3 403 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 MTDHQ86UE4 582 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 IGDCC3Q8IVU1 814 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 ATAD1Q8NBU5 361 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 NAF1Q96HR8 494 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 LRRC37BQ96QE4 947 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CCDC134Q9H6E4 229 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 FBXO6Q9NRD1 293 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 SLC38A7Q9NVC3 462 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 DDIT4Q9NX09 232 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 IL1RAPL1Q9NZN1 696 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 XPO7Q9UIA9 1087 aaKnown RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TTLL3Q9Y4R7 772 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CCDC78A2IDD5 438 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 CFAP69A5D8W1 941 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 GABRDO14764 452 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 MOCS2O96007 188 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 GCAP28676 217 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 GRIK1P39086 918 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 AP1B1Q10567 949 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 PCBP1Q15365 356 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRIM55-202ENST00000315962 TCTN1Q2MV58 587 aa7.86□□□□□ -1.15
TRIM55-202ENST00000315962 SLC39A12Q504Y0 691 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms