RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ATP13A4Q4VNC1 1196 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 CALR3Q96L12 384 aaKnown RBP23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 LRRC3BQ96PB8 259 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 TKTL2Q9H0I9 626 aa23.28■■□□□ 1.32
CCDC85B-201ENST00000312579 ENC1O14682 589 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 LAMP2P13473 410 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 DESP17661 470 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 CORO1AP31146 461 aaKnown RBP23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 CCR1P32246 355 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 PCK1P35558 622 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 GGCXP38435 758 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 NNTQ13423 1086 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 KCNT1Q5JUK3 1230 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 PTCRAQ6ISU1 281 aaPredicted RBP23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 NT5DC3Q86UY8 548 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 SMARCD2Q92925 531 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 L2HGDHQ9H9P8 463 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 LCMT1Q9UIC8 334 aa23.27■■□□□ 1.32
CCDC85B-201ENST00000312579 COL6A3P12111 3177 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 HELZP42694 1942 aaKnown RBP23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 KCNU1A8MYU2 1149 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 PRPSAP2O60256 369 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 GREM1O60565 184 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 FCARP24071 287 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 SLC1A1P43005 524 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 MARCKSL1P49006 195 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 TANGO2Q6ICL3 276 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 DENND1CQ8IV53 801 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 PLD4Q96BZ4 506 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 KLHL11Q9NVR0 708 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 ARHGEF38Q9NXL2 777 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 ZMYM5Q9UJ78 669 aa23.26■■□□□ 1.31
CCDC85B-201ENST00000312579 IL9P15248 144 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 DNA2P51530 1060 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 KPNA1P52294 538 aaPredicted RBP23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 RING1Q06587 406 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 TUBB2AQ13885 445 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 PPP2R5DQ14738 602 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 CA9Q16790 459 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 PARM1Q6UWI2 310 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 PEX26Q7Z412 305 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 SYCE1Q8N0S2 351 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 PYROXD2Q8N2H3 581 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 KRT35Q92764 455 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 SNRNP25Q9BV90 132 aaKnown RBP23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 TUBB2BQ9BVA1 445 aa23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.25■■□□□ 1.31
CCDC85B-201ENST00000312579 UNC80Q8N2C7 3258 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 GOLGA6L7A0A1B0GV03 622 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 C2CD4DB7Z1M9 353 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 PAGE1O75459 146 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 APOEP02649 317 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 ADRA1BP35368 520 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 SMAD2Q15796 467 aaKnown RBP23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 ZNF77Q15935 545 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 BRMS1LQ5PSV4 323 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 PAPD7Q5XG87 772 aaKnown RBP23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 OTOP3Q7RTS5 596 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 HSPH1Q92598 858 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 CD101Q93033 1021 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 RPGRIP1Q96KN7 1286 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 PLA2G2FQ9BZM2 168 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 AMFRQ9UKV5 643 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 AGO1Q9UL18 857 aaKnown RBP23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 FZD10Q9ULW2 581 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 SH3BP1Q9Y3L3 701 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 MRFAP1Q9Y605 127 aa23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 NUP210Q8TEM1 1887 aaPredicted RBP23.24■■□□□ 1.31
CCDC85B-201ENST00000312579 RARAP10276 462 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 WEE1P30291 646 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 HARS2P49590 506 aaKnown RBP23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 USP4Q13107 963 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 NADSYN1Q6IA69 706 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 CELF5Q8N6W0 485 aaKnown RBP23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 FGF14Q92915 247 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 KXD1Q9BQD3 176 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 RPP25Q9BUL9 199 aaKnown RBP23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 SIK2Q9H0K1 926 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 CDC23Q9UJX2 597 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 HEPACAM2A8MVW5 462 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 SLC2A3P11169 496 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 AMPD2Q01433 879 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 HADHQ16836 314 aaKnown RBP23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 ERMARDQ5T6L9 678 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 PIK3R6Q5UE93 754 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 NUGGCQ68CJ6 796 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 Q6ZNB5 142 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 UNC45BQ8IWX7 931 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 BBS7Q8IWZ6 715 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 PHF7Q9BWX1 381 aaPredicted RBP23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 TRPV4Q9HBA0 871 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 AP4E1Q9UPM8 1137 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 SAR1BQ9Y6B6 198 aa23.23■■□□□ 1.31
CCDC85B-201ENST00000312579 FAM72CH0Y354 149 aa23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 TRDMT1O14717 391 aaKnown RBP23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 MEI1Q5TIA1 1274 aa23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 FAM72AQ5TYM5 149 aa23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 FAM72DQ6L9T8 149 aa23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 FAM72BQ86X60 149 aa23.22■■□□□ 1.31
CCDC85B-201ENST00000312579 RHOT1Q8IXI2 618 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms