RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FSCBQ5H9T9 825 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 SLC26A9Q7LBE3 791 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 C14orf80Q86SX3 495 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 ALLCQ8N6M5 410 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 OR52K2Q8NGK3 314 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.4
SCFD1-201ENST00000311943 DDI1Q8WTU0 396 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 FAM204AQ9H8W3 233 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 KIAA1549LQ6ZVL6 1849 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 LAMA1P25391 3075 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 K7ESF4 209 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 SGK1O00141 431 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 ADH1CP00326 375 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 SP9P0CG40 484 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 HOXD9P28356 352 aaPredicted RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 HARS2P49590 506 aaKnown RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 CENPCQ03188 943 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 ARTNQ5T4W7 220 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 PIK3R6Q5UE93 754 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 SFMBT2Q5VUG0 894 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 EGFLAMQ63HQ2 1017 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 MON1BQ7L1V2 547 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 FRMD1Q8N878 549 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 GOLGA1Q92805 767 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 PLD4Q96BZ4 506 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 HHIPQ96QV1 700 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 PNKPQ96T60 521 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 NPY6RQ99463 290 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 TLR6Q9Y2C9 796 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 MRPS17Q9Y2R5 130 aaKnown RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.41
SCFD1-201ENST00000311943 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
SCFD1-201ENST00000311943 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 ACSL4O60488 711 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 HSF2BPO75031 334 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 PENKP01210 267 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-201ENST00000311943 FERP16591 822 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 HLA-FP30511 346 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-201ENST00000311943 SULT1E1P49888 294 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 TPM4P67936 248 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 EFHC1Q5JVL4 640 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 DGKKQ5KSL6 1271 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 C10orf76Q5T2E6 689 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF366Q8N895 744 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 IGSF8Q969P0 613 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 NELL2Q99435 816 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 OSBPL6Q9BZF3 934 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 SLC6A17Q9H1V8 727 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 MTG2Q9H4K7 406 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 CD93Q9NPY3 652 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 AIPL1Q9NZN9 384 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 ADAM22Q9P0K1 906 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 ARHGAP20Q9P2F6 1191 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 RAD54BQ9Y620 910 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
SCFD1-201ENST00000311943 LAMTOR5O43504 91 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CACNG3O60359 315 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 TBL1XO60907 577 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ADAM23O75077 832 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 DAB1O75553 588 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 TDGF1P13385 188 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 TNFAIP3P21580 790 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CD70P32970 193 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 MATKP42679 507 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 RPS9P46781 194 aaKnown RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 MLLT6P55198 1093 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 NR1H3Q13133 447 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 LPAL2Q16609 132 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ADGRF1Q5T601 910 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 WDR59Q6PJI9 974 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 IL17RCQ8NAC3 791 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 TXNDC5Q8NBS9 432 aaKnown RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 RXFP2Q8WXD0 754 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ATOH1Q92858 354 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 SERPINB11Q96P15 392 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CDK5RAP1Q96SZ6 601 aaKnown RBP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 SIK2Q9H0K1 926 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 DEC1Q9P2X7 70 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ADAMTS1Q9UHI8 967 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 A0A087X0T9 212 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 FAM228BP0C875 321 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 NOS2P35228 1153 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 NSFP46459 744 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms