RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
CASP3-201ENST00000308394 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.13□□□□□ -0.63
CASP3-201ENST00000308394 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 A0A1W2PRQ8 180 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 FSCN2O14926 492 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 KDELR1P24390 212 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 GLUD2P49448 558 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 PITX1P78337 314 aaPredicted RBP11.13□□□□□ -0.63
CASP3-201ENST00000308394 ROR1Q01973 937 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 KRT17Q04695 432 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 TFDP3Q5H9I0 405 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 PM20D1Q6GTS8 502 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 SPOCD1Q6ZMY3 1216 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 SRLQ86TD4 932 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 RNF168Q8IYW5 571 aaPredicted RBP11.13□□□□□ -0.63
CASP3-201ENST00000308394 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 SLC7A14Q8TBB6 771 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 N4BP2L2Q92802 583 aaPredicted RBP11.13□□□□□ -0.63
CASP3-201ENST00000308394 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
CASP3-201ENST00000308394 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 PNKPQ96T60 521 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 HERPUD2Q9BSE4 406 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 SPO11Q9Y5K1 396 aa11.13□□□□□ -0.63
CASP3-201ENST00000308394 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 TLL1O43897 1013 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 URODP06132 367 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 FYNP06241 537 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CD48P09326 243 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 ATP2A2P16615 1042 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 PPM1AP35813 382 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 MAGEA11P43364 429 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CCNHP51946 323 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 CDH6P55285 790 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 HTRA4P83105 476 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 RCN1Q15293 331 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 BOLA3Q53S33 107 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 SLC8B1Q6J4K2 584 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 DDX53Q86TM3 631 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 FAM131BQ86XD5 332 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 HERC6Q8IVU3 1022 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 TMEM151BQ8IW70 566 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 IRGQQ8WZA9 623 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 SLC2A13Q96QE2 648 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 QPCTLQ9NXS2 382 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 BACE2Q9Y5Z0 518 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 EME2A4GXA9 379 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 RAD51CO43502 376 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 FGF18O76093 207 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 TJP3O95049 919 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 BPIFB3P59826 476 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 COPS2P61201 443 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 DSG1Q02413 1049 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 KRT81Q14533 505 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 PRELID2Q8N945 189 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 C2orf15Q8WU43 125 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 ANKRD49Q8WVL7 239 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 C1orf54Q8WWF1 131 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 HERVK_113Q902F9 699 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 NPY6RQ99463 290 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 RAD9AQ99638 391 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 ALPK3Q96L96 1907 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 IFRD1O00458 451 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 PHF2O75151 1096 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 VNN2O95498 520 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CDKN2BP42772 138 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
CASP3-201ENST00000308394 DYNLT1P63172 113 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 ERMARDQ5T6L9 678 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 BTBD8Q5XKL5 378 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CYP4V2Q6ZWL3 525 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 BHLHA9Q7RTU4 235 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 SNRNP25Q9BV90 132 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 OSBPL10Q9BXB5 764 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
CASP3-201ENST00000308394 FBXO44Q9H4M3 255 aa11.12□□□□□ -0.63
CASP3-201ENST00000308394 MRPL17Q9NRX2 175 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms