RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 OBSL1O75147 1896 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 LINC01553A4QN01 128 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FAM187AA6NFU0 413 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ZNF487B1APH4 448 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FAM72CH0Y354 149 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MYOGP15173 224 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 GOT1P17174 413 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 DNAJB1P25685 340 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ECHS1P30084 290 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 CTNNB1P35222 781 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ADRA1BP35368 520 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 BMPR1AP36894 532 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 OTUD4Q01804 1114 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 KRT17Q04695 432 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 SCAPQ12770 1279 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FAM72AQ5TYM5 149 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TPGS2Q68CL5 300 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 SLC9A4Q6AI14 798 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FAM72DQ6L9T8 149 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FAM72BQ86X60 149 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 PSTKQ8IV42 348 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MAP7D3Q8IWC1 876 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 SLC35B2Q8TB61 432 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ACTL9Q8TC94 416 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 NTAN1Q96AB6 310 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ZBTB9Q96C00 473 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 CSPG4P5Q96PW8 444 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 LBHD1Q9BQE6 289 aaPredicted RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 C17orf80Q9BSJ5 609 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TRIM62Q9BVG3 475 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TTLL2Q9BWV7 592 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 NEUROG2Q9H2A3 272 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 RXFP1Q9HBX9 757 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ALG13Q9NP73 1137 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ETNK2Q9NVF9 386 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 COMMD8Q9NX08 183 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 CWC15Q9P013 229 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 FBXW11Q9UKB1 542 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MAGED2Q9UNF1 606 aaPredicted RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 NEU2Q9Y3R4 380 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MFHAS1Q9Y4C4 1052 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 YIPF1Q9Y548 306 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 SNX10Q9Y5X0 201 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ANAPC1Q9H1A4 1944 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 GRXCR1A8MXD5 290 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 APOC4-APOC2K7ER74 178 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 DAPK3O43293 454 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ECEL1O95672 775 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 F9P00740 461 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 APOC2P02655 101 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TUBBP07437 444 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 CNPP09543 421 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ZDHHC11BP0C7U3 371 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 HMGA1P17096 107 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TUFMP49411 452 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ERVFC1P60507 584 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 SEMA3BQ13214 749 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 OASLQ15646 514 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 BEND6Q5SZJ8 279 aaPredicted RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 DUPD1Q68J44 220 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MSANTD2Q6P1R3 559 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 DRICH1Q6PGQ1 229 aaPredicted RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 PRUNE1Q86TP1 453 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 IFT20Q8IY31 132 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 GPR65Q8IYL9 337 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 GLIS1Q8NBF1 620 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ATL2Q8NHH9 583 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 HNRNPLLQ8WVV9 542 aaKnown RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 RUNDC3BQ96NL0 473 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ERP44Q9BS26 406 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TRIM31Q9BZY9 425 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 DPH5Q9H2P9 285 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 C10orf88Q9H8K7 445 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 HOMER3Q9NSC5 361 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ARGLU1Q9NWB6 273 aaPredicted RBP7.22□□□□□ -1.25
PTCD2-201ENST00000308077 HSFX1Q9UBD0 423 aa7.22□□□□□ -1.25
PTCD2-201ENST00000308077 ATG2AQ2TAZ0 1938 aa7.21□□□□□ -1.25
PTCD2-201ENST00000308077 ZFHX4Q86UP3 3567 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 APOL1O14791 398 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 SASH3O75995 380 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CSPG5O95196 566 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 TBX18O95935 607 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 SPATA31D3P0C874 917 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 RARGP13631 454 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 AMPD1P23109 780 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 MCM3P25205 808 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CA8P35219 290 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 GGCXP38435 758 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 AIF1P55008 147 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 VCPP55072 806 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 BYSLQ13895 437 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 NOMO1Q15155 1222 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 TRIP13Q15645 432 aaPredicted RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 EFHC2Q5JST6 749 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 ARTNQ5T4W7 220 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms