RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 FBXO25Q8TCJ0 367 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 SPPL2BQ8TCT7 592 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 LENG1Q96BZ8 264 aaPredicted RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 HDAC11Q96DB2 347 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 CEP19Q96LK0 163 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 PURBQ96QR8 312 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 TMEM120AQ9BXJ8 343 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 WARS2Q9UGM6 360 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 CIDEBQ9UHD4 219 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 TTC7AQ9ULT0 858 aaPredicted RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 GTPBP10A4D1E9 387 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 H2AFYO75367 372 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 CHKAP35790 457 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 ITGA9Q13797 1035 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 ANO4Q32M45 955 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 MARK2Q7KZI7 788 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 PATL1Q86TB9 770 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 ITFG2Q969R8 447 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 SCLYQ96I15 445 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 C9orf72Q96LT7 481 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 TEPSINQ96N21 525 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 ELOVL4Q9GZR5 314 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 LRMDAQ9H2I8 198 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 ASNSD1Q9NWL6 643 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 CDV3Q9UKY7 258 aaKnown RBP6.56□□□□□ -1.36
SCAPER-201ENST00000303521 PADI3Q9ULW8 664 aa6.56□□□□□ -1.36
SCAPER-201ENST00000303521 A0A0U1RQJ8 604 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 C1QTNF3-AMACRE9PGA6 284 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 GOLGA8SH3BPF8 625 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 GOLGA8MH3BSY2 632 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 GSTA4O15217 222 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 KLHL41O60662 606 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 APOA1P02647 267 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 SNRPAP09012 282 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 IQCF3P0C7M6 154 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PON1P27169 355 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 KCNJ2P63252 427 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PPP2R5CQ13362 524 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 CDH18Q13634 790 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PDGFRLQ15198 375 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 INAQ16352 499 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 COBLL1Q53SF7 1204 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 THEMIS2Q5TEJ8 643 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 FOXR2Q6PJQ5 311 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 C4orf22Q6V702 233 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PPIL6Q8IXY8 311 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 TRPC4APQ8TEL6 797 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 EME1Q96AY2 570 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 RNF25Q96BH1 459 aaPredicted RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 ARHGEF26Q96DR7 871 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 CORO1BQ9BR76 489 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 NUSAP1Q9BXS6 441 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 CALN1Q9BXU9 219 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PACSIN1Q9BY11 444 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 MRPS26Q9BYN8 205 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 GTF3C4Q9UKN8 822 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 RNF103-CHMP3A0A140T963 221 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 XIRP2A4UGR9 3374 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 ZSCAN5CA6NGD5 496 aaPredicted RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 SMNDC1O75940 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 FAM58BPP0C7Q3 252 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 SLC9A1P19634 815 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 BMP6P22004 513 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 EPHB2P29323 1055 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PURAQ00577 322 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 LAMTOR4Q0VGL1 99 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 LLGL1Q15334 1064 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 TRIM16LQ309B1 348 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 WDR59Q6PJI9 974 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 CCDC80Q76M96 950 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 WDR60Q8WVS4 1066 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 NMD3Q96D46 503 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 ADA2Q9NZK5 511 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 SEPT10Q9P0V9 454 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 ITGA11Q9UKX5 1188 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 SIK3Q9Y2K2 1263 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 REXO2Q9Y3B8 237 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 DLEC1Q9Y238 1755 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 TBC1D3BA6NDS4 549 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PIK3R2O00459 728 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 DAB1O75553 588 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 FBXO21O94952 628 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 KRT8P05787 483 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PSMC3P17980 439 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 MLH1P40692 756 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 GCLMP48507 274 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 BROXQ5VW32 411 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 AMIGO3Q86WK7 504 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PASD1Q8IV76 773 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 PPP1R2P1Q96PQ5 205 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 KLHL5Q96PQ7 755 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 DUSP9Q99956 384 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 MMTAG2Q9BU76 263 aaKnown RBP6.55□□□□□ -1.36
SCAPER-201ENST00000303521 BLOC1S6Q9UL45 172 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 VCANP13611 3396 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 ACKR2O00590 384 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 LCA5LO95447 670 aa6.55□□□□□ -1.36
SCAPER-201ENST00000303521 TDP2O95551 362 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms