RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 MTSS1O43312 755 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 FGBP02675 491 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 MATKP42679 507 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 THEMIS2Q5TEJ8 643 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 PTAR1Q7Z6K3 402 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TMCO2Q7Z6W1 182 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TRIM42Q8IWZ5 723 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 KATNAL2Q8IYT4 538 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 PYROXD2Q8N2H3 581 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 PSMC3IPQ9P2W1 217 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 COQ4Q9Y3A0 265 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 A0A1W2PQH9 124 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ANXA9O76027 345 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 GABRR2P28476 465 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ASPAP45381 313 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 WNT7BP56706 349 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ANKRD20A8PQ5CZ79 823 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 HECTD3Q5T447 861 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ATG16L1Q676U5 607 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ITIH5Q86UX2 942 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 XYLT1Q86Y38 959 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 WDR75Q8IWA0 830 aaKnown RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 EMILIN2Q9BXX0 1053 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TRIM55Q9BYV6 548 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SRCAPQ6ZRS2 3230 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 APOC4-APOC2K7ER74 178 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 LRCH4O75427 683 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 RTN3O95197 1032 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 APOC2P02655 101 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 LBX1P52954 281 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TMTC4Q5T4D3 741 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 UNC45BQ8IWX7 931 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 HES6Q96HZ4 224 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 FBXL18Q96ME1 805 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 RNF157Q96PX1 679 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 FIZ1Q96SL8 496 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 MYH7P12883 1935 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 PTPRZ1P23471 2315 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 SDR42E2A6NKP2 422 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TBX18O95935 607 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 IQCF3P0C7M6 154 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TAC1P20366 129 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MAP2K2P36507 400 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 RBBP5Q15291 538 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MAF1Q9H063 256 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 XAB2Q9HCS7 855 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 IARS2Q9NSE4 1012 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TBC1D13Q9NVG8 400 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 IRAK4Q9NWZ3 460 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 SPG21Q9NZD8 308 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 GMIPQ9P107 970 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 SIX4Q9UIU6 781 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 CITO14578 2027 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 E7ENQ6 273 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 XPO1O14980 1071 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MGAT1P26572 445 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 RASSF2P50749 326 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 SLC5A3P53794 718 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 GJA9P57773 515 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PDAP1Q13442 181 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MAMDC4Q6UXC1 1216 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 GIMAP7Q8NHV1 300 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MYCBPAPQ8TBZ2 947 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 ULK4Q96C45 1275 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 UROC1Q96N76 676 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 NRDE2Q9H7Z3 1164 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TRIM66O15016 1216 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 SNRPAP09012 282 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PLA2G4AP47712 749 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 NR1H3Q13133 447 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PTRHD1Q6GMV3 140 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 LPCAT1Q8NF37 534 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 DCUN1D1Q96GG9 259 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PAAF1Q9BRP4 392 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PCDH9Q9HC56 1237 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 MRPS23Q9Y3D9 190 aaKnown RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 A0A0U1RQF3 1178 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 NRP1O14786 923 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 PPFIA2O75334 1257 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 ITGBL1O95965 494 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 STX1BP61266 288 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 GBE1Q04446 702 aa10.47□□□□□ -0.73
GABRB3-201ENST00000299267 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-201ENST00000299267 HSP90AA5PQ58FG0 334 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms