RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TMEM176AQ96HP8 235 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 SDCBP2Q9H190 292 aa22.03■■□□□ 1.12
SMCO4-201ENST00000298966 RCCD1A6NED2 376 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 MMEP08473 750 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 RAD23BP54727 409 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 SEC13P55735 322 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 C2orf27AQ580R0 203 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 TRIM61Q5EBN2 209 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 SDHAF4Q5VUM1 108 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 CTNNBL1Q8WYA6 563 aaPredicted RBP22.02■■□□□ 1.12
SMCO4-201ENST00000298966 LACRTQ9GZZ8 138 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 TMLHEQ9NVH6 421 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 MMP17Q9ULZ9 603 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 MSRB2Q9Y3D2 182 aa22.02■■□□□ 1.12
SMCO4-201ENST00000298966 TADA3O75528 432 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 ALDH1A2O94788 518 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 CYP1A1P04798 512 aaPredicted RBP22.01■■□□□ 1.11
SMCO4-201ENST00000298966 MYBL1P10243 752 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 WARSP23381 471 aaKnown RBP22.01■■□□□ 1.11
SMCO4-201ENST00000298966 MAPK8P45983 427 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 TCEAL1Q15170 157 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 CLEC16AQ2KHT3 1053 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 TAF3Q5VWG9 929 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 ACAD10Q6JQN1 1059 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 LPCAT2Q7L5N7 544 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 MDGA1Q8NFP4 955 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 TRMT2BQ96GJ1 504 aaKnown RBP22.01■■□□□ 1.11
SMCO4-201ENST00000298966 VCPIP1Q96JH7 1222 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 CYP2S1Q96SQ9 504 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 LHX5Q9H2C1 402 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 DNAI1Q9UI46 699 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 PTPRDP23468 1912 aa22.01■■□□□ 1.11
SMCO4-201ENST00000298966 ANAPC1Q9H1A4 1944 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 MYH10P35580 1976 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 MAP3K13O43283 966 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 NFATC1O95644 943 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 UNGP13051 313 aaPredicted RBP22■■□□□ 1.11
SMCO4-201ENST00000298966 CDH5P33151 784 aaPredicted RBP22■■□□□ 1.11
SMCO4-201ENST00000298966 LHX1P48742 406 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 NDST1P52848 882 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 CDH8P55286 799 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 CENPCQ03188 943 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 CRY1Q16526 586 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 DDR2Q16832 855 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SOWAHAQ2M3V2 549 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 RHOT2Q8IXI1 618 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 CCDC33Q8N5R6 958 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SLC4A11Q8NBS3 891 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 TMEM35BQ8NCS4 154 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 TRIM58Q8NG06 486 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SH3RF2Q8TEC5 729 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 WHAMMQ8TF30 809 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 TNIP3Q96KP6 325 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SPACA7Q96KW9 195 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 ALS2CR12Q96Q35 445 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SLC22A12Q96S37 553 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 SNX25Q9H3E2 840 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 GUCA1BQ9UMX6 200 aa22■■□□□ 1.11
SMCO4-201ENST00000298966 TNFRSF10BO14763 440 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 CASQ1P31415 396 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 RDXP35241 583 aaKnown RBP21.99■■□□□ 1.11
SMCO4-201ENST00000298966 GALCP54803 685 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 CNGA2Q16280 664 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 SGO2Q562F6 1265 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 ZNF569Q5MCW4 686 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 MSANTD4Q8NCY6 345 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 ZNF592Q92610 1267 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 MYRFLQ96LU7 910 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 NOX5Q96PH1 765 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 PCDHB18PQ96TA0 734 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 ABCB6Q9NP58 842 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 TRIM10Q9UDY6 481 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 KLK13Q9UKR3 277 aa21.99■■□□□ 1.11
SMCO4-201ENST00000298966 TNRC6BQ9UPQ9 1833 aaKnown RBP21.99■■□□□ 1.11
SMCO4-201ENST00000298966 DMXL2Q8TDJ6 3036 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 HELZP42694 1942 aaKnown RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 K7EQS6 105 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ABL1P00519 1130 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 FTLP02792 175 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 CD19P15391 556 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ENGP17813 658 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 CYP2F1P24903 491 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 OPRD1P41143 372 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 DPP6P42658 865 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 NSFP46459 744 aaKnown RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 HADHBP55084 474 aaKnown RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 SIM1P81133 766 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 MRPS21P82921 87 aaKnown RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ARMCX6Q7L4S7 300 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 PHF13Q86YI8 300 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 SYT12Q8IV01 421 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ADGRF2Q8IZF7 708 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 CRYBG2Q8N1P7 616 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ARL14EPQ8N8R7 260 aaPredicted RBP21.98■■□□□ 1.11
SMCO4-201ENST00000298966 OR6B3Q8NGW1 331 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 RFFLQ8WZ73 363 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 WDR24Q96S15 920 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 ELOVL4Q9GZR5 314 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 LINC00597Q9H2U6 94 aa21.98■■□□□ 1.11
SMCO4-201ENST00000298966 GTF3C4Q9UKN8 822 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms