RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 TTLL3Q9Y4R7 772 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 CCND2P30279 289 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 PCDH20Q8N6Y1 951 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 SREK1Q8WXA9 508 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 C20orf27Q9GZN8 174 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 IL1RL2Q9HB29 575 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 RBAKQ9NYW8 714 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 RSL24D1Q9UHA3 163 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 SSX2IPQ9Y2D8 614 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 V9GYQ6 96 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 GOLGA4Q13439 2230 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 PSMD10O75832 226 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 AMHP03971 560 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 TFAP2AP05549 437 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 TFE3P19532 575 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 FSCBQ5H9T9 825 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 DUS1LQ6P1R4 473 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 ANKRD13AQ8IZ07 590 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 TSNARE1Q96NA8 513 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 DMTF1Q9Y222 760 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 TMA7Q9Y2S6 64 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 ANKRD12Q6UB98 2062 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 SAC3D1A6NKF1 404 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 HSD17B4P51659 736 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 CSE1LP55060 971 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 CUL2Q13617 745 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 PPM1JQ5JR12 505 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 MSTO1Q9BUK6 570 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 KLC2Q9H0B6 622 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 AVENQ9NQS1 362 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 EPS15L1Q9UBC2 864 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 LSM1O15116 133 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 AKAP10O43572 662 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 NOMO3P69849 1222 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 SAMD3Q8N6K7 520 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 ZBTB8BQ8NAP8 495 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 NSUN6Q8TEA1 469 aaKnown RBP15.29■□□□□ 0.04
SPIDR-201ENST00000297423 SLC44A1Q8WWI5 657 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 CYGBQ8WWM9 190 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 TMEM143Q96AN5 459 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 PPCSQ9HAB8 311 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 GPAMQ9HCL2 828 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 ARHGEF4Q9NR80 690 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 UBAP1Q9NZ09 502 aa15.29■□□□□ 0.04
SPIDR-201ENST00000297423 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 GRIN3BO60391 1043 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 UNGP13051 313 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ZFXP17010 805 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 BCAR1P56945 870 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 LDLRAP1Q5SW96 308 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 XKR5Q6UX68 686 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 SNX31Q8N9S9 440 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 MPHOSPH6Q99547 160 aaKnown RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 EURLQ9NYK6 297 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 J3QRK9 145 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 VILLO15195 856 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 KDM1AO60341 852 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ALOX15P16050 662 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ADSSP30520 456 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 GLRBP48167 497 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 TPD52P55327 224 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 DMPKQ09013 629 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 NEDD8Q15843 81 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 AAGABQ6PD74 315 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 CATSPERGQ6ZRH7 1159 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 C10orf107Q8IVU9 208 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 DDHD1Q8NEL9 900 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 PDZD8Q8NEN9 1154 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 GABPB2Q8TAK5 448 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 JADE3Q92613 823 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 FBXL8Q96CD0 374 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 RIT2Q99578 217 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 TGDSO95455 350 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 COX4I1P13073 169 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 ITGADQ13349 1161 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 CARTPTQ16568 116 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 C6orf183Q5T699 404 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 GPR141Q7Z602 305 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms