RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ETV4P43268 484 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 CPT1AP50416 773 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 NEK3P51956 506 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 ICE2Q659A1 982 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 RNF43Q68DV7 783 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 CASC4Q6P4E1 433 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 HTR3CQ8WXA8 447 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 P2RY11Q96G91 374 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 OXNAD1Q96HP4 312 aaPredicted RBP12.17□□□□□ -0.46
RHO-201ENST00000296271 QKIQ96PU8 341 aaKnown RBP eCLIP12.17□□□□□ -0.46
RHO-201ENST00000296271 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 LRRC4Q9HBW1 653 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 SENP1Q9P0U3 644 aa12.17□□□□□ -0.46
RHO-201ENST00000296271 MGRN1O60291 552 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 MGEA5O60502 916 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 YY1P25490 414 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 ABCG1P45844 678 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 BRCC3P46736 316 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ZDHHC17Q8IUH5 632 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 SRPK1Q96SB4 655 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 MANSC1Q9H8J5 431 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 CYLDQ9NQC7 956 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 FBXO6Q9NRD1 293 aaPredicted RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 PCMTD2Q9NV79 361 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 RNF103O00237 685 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 GCATO75600 419 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 RFPL1O75677 317 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 AP1G2O75843 785 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 DGKIO75912 1065 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ZWINTO95229 277 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 APOEP02649 317 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 GSTA1P08263 222 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ATP2A2P16615 1042 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 MGAT1P26572 445 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 PGFP49763 221 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 PGGT1BP53609 377 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 RASA2Q15283 850 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 C17orf99Q6UX52 265 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ZCCHC23Q6ZST2 131 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 CDKL3Q8IVW4 592 aaPredicted RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 SIX6OS1Q8N1H7 587 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 NPWQ8N729 165 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
RHO-201ENST00000296271 TNIP3Q96KP6 325 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 HSFY1Q96LI6 401 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 NPY6RQ99463 290 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
RHO-201ENST00000296271 CCDC78A2IDD5 438 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 ITGB1P05556 798 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 AXLP30530 894 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 RDXP35241 583 aaKnown RBP12.15□□□□□ -0.46
RHO-201ENST00000296271 ARL4AP40617 200 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 MAGEA3P43357 314 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 SNCBQ16143 134 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 TIGD5Q53EQ6 642 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
RHO-201ENST00000296271 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 TTC7BQ86TV6 843 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 SLC26A11Q86WA9 606 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 SUGP1Q8IWZ8 645 aaKnown RBP12.15□□□□□ -0.46
RHO-201ENST00000296271 APOPT1Q96IL0 206 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 EBNA1BP2Q99848 306 aaKnown RBP12.15□□□□□ -0.46
RHO-201ENST00000296271 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
RHO-201ENST00000296271 C20orf27Q9GZN8 174 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 NOD2Q9HC29 1040 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
RHO-201ENST00000296271 IQANK1A0A1B0GTG1 560 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 GABRDO14764 452 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 NEFHP12036 1026 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 NCAM1P13591 858 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 NUMBP49757 651 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 SLC18A1P54219 525 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 CRHR2Q13324 411 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 RGS9BPQ6ZS82 235 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms