RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 FAM136AQ96C01 138 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 ZNF317Q96PQ6 595 aaPredicted RBP13.8□□□□□ -0.2
HPS3-201ENST00000296051 ATXN3LQ9H3M9 355 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 MFSD1Q9H3U5 465 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 CYP4F12Q9HCS2 524 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 NKX1-2Q9UD57 310 aaPredicted RBP13.8□□□□□ -0.2
HPS3-201ENST00000296051 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
HPS3-201ENST00000296051 ASTN2O75129 1339 aaPredicted RBP13.8□□□□□ -0.2
HPS3-201ENST00000296051 FRMPD4Q14CM0 1322 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 GOLGA8TH3BQL2 631 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 GLRA2P23416 452 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 NRF1Q16656 503 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 APBA2Q99767 749 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 CABYRO75952 493 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SPRP35270 261 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 PCYT1AP49585 367 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 MCL1Q07820 350 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 DCAF12L1Q5VU92 463 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SHC3Q92529 594 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 WDCPQ9H6R7 721 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 GSC2O15499 205 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PSMC3P17980 439 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 IL10P22301 178 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 TTC33Q6PID6 262 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 C16orf89Q6UX73 402 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 TTC7BQ86TV6 843 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.2
HPS3-201ENST00000296051 RXFP2Q8WXD0 754 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SEMA6AQ9H2E6 1030 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 ZDHHC18Q9NUE0 388 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 UBP1Q9NZI7 540 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 C5orf60A6NFR6 353 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 ZNF197O14709 1029 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PEX10O60683 326 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 POLBP06746 335 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 C16orf72Q14CZ0 275 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 HS6ST3Q8IZP7 471 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 KCTD17Q8N5Z5 321 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 NETO2Q8NC67 525 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 MAGEC3Q8TD91 643 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SLC28A3Q9HAS3 691 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 WASF2Q9Y6W5 498 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 E7ENQ6 273 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PTGIRP43119 386 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 MARSP56192 900 aaKnown RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 HDAC4P56524 1084 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 MAP3K7CLP57077 242 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PPIDQ08752 370 aaKnown RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 CYP2R1Q6VVX0 501 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PTAR1Q7Z6K3 402 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 VSIG10LQ86VR7 867 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 CDRT15Q96T59 188 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
HPS3-201ENST00000296051 LRMDAQ9H2I8 198 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 SLC25A13Q9UJS0 675 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 PLA2G4CQ9UP65 541 aa13.79□□□□□ -0.2
HPS3-201ENST00000296051 YDJCA8MPS7 323 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 LIASO43766 372 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 KDM1AO60341 852 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 USP12O75317 370 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 ANPEPP15144 967 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 FGFR3P22607 806 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 RPL22P35268 128 aaKnown RBP13.78□□□□□ -0.2
HPS3-201ENST00000296051 TMED10P49755 219 aaKnown RBP13.78□□□□□ -0.2
HPS3-201ENST00000296051 PDAP1Q13442 181 aaKnown RBP13.78□□□□□ -0.2
HPS3-201ENST00000296051 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 ACBD5Q5T8D3 534 aaPredicted RBP13.78□□□□□ -0.2
HPS3-201ENST00000296051 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 PPP4R4Q6NUP7 873 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 FAM131BQ86XD5 332 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 ZNF570Q96NI8 536 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 CATSPER2Q96P56 530 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 SIKE1Q9BRV8 207 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
HPS3-201ENST00000296051 ORC6Q9Y5N6 252 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 SNX5Q9Y5X3 404 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 H0YGN5 161 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
HPS3-201ENST00000296051 ERLEC1Q96DZ1 483 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms