RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CES2O00748 559 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 MOCS2O96007 188 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 IGHA2P01877 340 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RAB27AP51159 221 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 OASLQ15646 514 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMPRSS6Q8IU80 811 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 CCDC103Q8IW40 242 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 MFN1Q8IWA4 741 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 C1orf131Q8NDD1 294 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 PCDHB7Q9Y5E2 793 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RLFQ13129 1914 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SAC3D1A6NKF1 404 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 MYO1GB0I1T2 1018 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLCO1B7G3V0H7 640 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 MAP2K7O14733 419 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 BAIAP3O94812 1187 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 ACOT2P49753 483 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CDK7P50613 346 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 PTENP60484 403 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 KIZQ2M2Z5 673 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 NAPEPLDQ6IQ20 393 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 EIF1ADQ8N9N8 165 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CASP10Q92851 521 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM143Q96AN5 459 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 KCND1Q9NSA2 647 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM153AQ9UHL3 310 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 LCP1P13796 627 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 PON1P27169 355 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 SULT1E1P49888 294 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 SERPINB8P50452 374 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 RAD51Q06609 339 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 MCL1Q07820 350 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAAP100Q0VG06 881 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 PTK6Q13882 451 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CENPPQ6IPU0 288 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 LAYNQ6UX15 382 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM71DQ8N9W8 422 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 NMD3Q96D46 503 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 NIF3L1Q9GZT8 377 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 KLHL25Q9H0H3 589 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 IGKV6D-21A0A0A0MT36 114 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 EVPLLA8MZ36 301 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 H0YGN5 161 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZBTB39O15060 712 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 SASH3O75995 380 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CKBP12277 381 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 GPD1P21695 349 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CNTFP26441 200 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 FDFT1P37268 417 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 UBE3AQ05086 875 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 TSHZ1Q6ZSZ6 1077 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 PLEKHM3Q6ZWE6 761 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 ARHGAP22Q7Z5H3 698 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 RIN3Q8TB24 985 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 AENQ8WTP8 325 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 TRAPPC9Q96Q05 1148 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 GGA2Q9UJY4 613 aa12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-201ENST00000293748 NDUFS3O75489 264 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 VTNP04004 478 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 HIST1H2AGP0C0S8 130 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 HIST1H2ADP20671 130 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 AXLP30530 894 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 CCDC126Q96EE4 140 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 H2AFJQ9BTM1 129 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 BRD8Q9H0E9 1235 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM51Q9NW97 253 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 C5orf58C9J3I9 102 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 LZTS3O60299 673 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 TPST1O60507 370 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 MED24O75448 989 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 DLGAP3O95886 979 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 RARRES1P49788 294 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 RGS19P49795 217 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SPDYAQ5MJ70 313 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLC26A11Q86WA9 606 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 ATPAF2Q8N5M1 289 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
SYNGAP1-201ENST00000293748 PGM2Q96G03 612 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms