RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ELAC2Q9BQ52 826 aaKnown RBP17.4■□□□□ 0.38
CPSF4-201ENST00000292476 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
CPSF4-201ENST00000292476 NGRNQ9NPE2 291 aaKnown RBP17.4■□□□□ 0.38
CPSF4-201ENST00000292476 KLC4Q9NSK0 619 aa17.4■□□□□ 0.38
CPSF4-201ENST00000292476 CFAP73A6NFT4 308 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 F8W810 466 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 CAPN9O14815 690 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 KRT10P13645 584 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 DNAJB2P25686 324 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 IFNAR2P48551 515 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 GATMP50440 423 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 DAOAP59103 153 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ADCY1Q08828 1119 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 SLC39A12Q504Y0 691 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 RNASEH2BQ5TBB1 312 aaKnown RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 BEND5Q7L4P6 421 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 LRRTM3Q86VH5 581 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 CEP57Q86XR8 500 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ARFGAP1Q8N6T3 406 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ZMIZ2Q8NF64 920 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 MAML1Q92585 1016 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 FAM161BQ96MY7 647 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 SLC9A7Q96T83 725 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 TTPALQ9BTX7 342 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 MARCH5Q9NX47 278 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 STK39Q9UEW8 545 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PCSK1NQ9UHG2 260 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PCDHB5Q9Y5E4 795 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 C3orf70A6NLC5 250 aaPredicted RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PI4K2BG5E9Z4 385 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 MDM4O15151 490 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ALOX15BO15296 676 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PRPF4O43172 522 aaKnown RBP eCLIP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 MYOGP15173 224 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 TSHRP16473 764 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 KDELR1P24390 212 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 GRIK1P39086 918 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 MAGEA11P43364 429 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ATP11AP98196 1134 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 TAF5Q15542 800 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 C15orf59Q2T9L4 293 aaPredicted RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PM20D1Q6GTS8 502 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 FAM117BQ6P1L5 589 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 BBS12Q6ZW61 710 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 CENPUQ71F23 418 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 PSTKQ8IV42 348 aaKnown RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 CMTR2Q8IYT2 770 aaKnown RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 SLC2A13Q96QE2 648 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 KCNK16Q96T55 309 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 C11orf84Q9BUA3 381 aaPredicted RBP17.39■□□□□ 0.37
CPSF4-201ENST00000292476 GPR62Q9BZJ7 368 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 ULBP1Q9BZM6 244 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 SAYSD1Q9NPB0 183 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 KCNK9Q9NPC2 374 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 SLC24A2Q9UI40 661 aa17.39■□□□□ 0.37
CPSF4-201ENST00000292476 EXOC1LA0A1B0GW35 172 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 HHLA1C9JL84 531 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 TCF4P15884 667 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 PPARDQ03181 441 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 GPS1Q13098 491 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 CDO1Q16878 200 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 SPRED3Q2MJR0 410 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 USP41Q3LFD5 358 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 ATP13A4Q4VNC1 1196 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 KAZNQ674X7 775 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 TRNP1Q6NT89 227 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 SCYL2Q6P3W7 929 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 DEFB106AQ8N104 65 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 DEFB123Q8N688 67 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 MAGEC3Q8TD91 643 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 CLEC4CQ8WTT0 213 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF689Q96CS4 500 aaPredicted RBP17.38■□□□□ 0.37
CPSF4-201ENST00000292476 C8orf48Q96LL4 319 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 C9orf72Q96LT7 481 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 MAK16Q9BXY0 300 aaKnown RBP17.38■□□□□ 0.37
CPSF4-201ENST00000292476 TMLHEQ9NVH6 421 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 DNAJC17Q9NVM6 304 aaKnown RBP17.38■□□□□ 0.37
CPSF4-201ENST00000292476 KLHL11Q9NVR0 708 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 CTNNAL1Q9UBT7 734 aa17.38■□□□□ 0.37
CPSF4-201ENST00000292476 SMG5Q9UPR3 1016 aaKnown RBP17.38■□□□□ 0.37
CPSF4-201ENST00000292476 YBX2Q9Y2T7 364 aaKnown RBP17.38■□□□□ 0.37
CPSF4-201ENST00000292476 FAM47DPA6NHR8 397 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF487B1APH4 448 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 TCP11X1B4DZS4 312 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 F9P00740 461 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 LTFP02788 710 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 PECAM1P16284 738 aaPredicted RBP17.37■□□□□ 0.37
CPSF4-201ENST00000292476 LAG3P18627 525 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 IL1R2P27930 398 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 STX2P32856 288 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 AIF1P55008 147 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 IL9RQ01113 521 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 TFDP2Q14188 446 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 DCAF6Q58WW2 860 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 SPOUT1Q5T280 376 aaKnown RBP17.37■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF697Q5TEC3 545 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 RGS9BPQ6ZS82 235 aa17.37■□□□□ 0.37
CPSF4-201ENST00000292476 TRABD2AQ86V40 505 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms