RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SENP6Q9GZR1 1112 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 LRRC4CQ9HCJ2 640 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SENP1Q9P0U3 644 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ITGA11Q9UKX5 1188 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PNMA8BQ9ULN7 279 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 CDY2AQ9Y6F7 541 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 H0Y626 953 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 UGT1A9O60656 530 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SHOX2O60902 331 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 SOAT2O75908 522 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 FSBPO95073 299 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 VNN1O95497 513 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CHEK2O96017 543 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 STIP1P31948 543 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 ACADSBP45954 432 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC1A6P48664 564 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PSEN2P49810 448 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TUBP50607 506 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 FKBP1AP62942 108 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 DDR2Q16832 855 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 AP1ARQ63HQ0 302 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CAPRIN2Q6IMN6 1127 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 PMF1Q6P1K2 205 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CMC1Q7Z7K0 106 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 KATNAL2Q8IYT4 538 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CYP4X1Q8N118 509 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CFAP52Q8N1V2 620 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SNX31Q8N9S9 440 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GLIS1Q8NBF1 620 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GCNAQ96QF7 691 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MINDY3Q9H8M7 445 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 UGT1A7Q9HAW7 530 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 UGT1A10Q9HAW8 530 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 UGT1A8Q9HAW9 530 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ETNK2Q9NVF9 386 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 BCAP29Q9UHQ4 241 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CNTNAP1P78357 1384 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ZNF536O15090 1300 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TCRBV7S3A2A0A539 114 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SIGLEC16A6NMB1 481 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 NFKBIEO00221 500 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PPEF2O14830 753 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 DCXO43602 365 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 LSM8O95777 96 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CD52P31358 61 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 AKT1P31749 480 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PKNOX1P55347 436 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 KRT33BQ14525 404 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 UBAP2Q5T6F2 1119 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ZCCHC9Q8N567 271 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ALLCQ8N6M5 410 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TDRD5Q8NAT2 981 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 SHCBP1Q8NEM2 672 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PYDC1Q8WXC3 89 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SCG3Q8WXD2 468 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.91□□□□□ -1.62
UBR1-201ENST00000290650 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.91□□□□□ -1.62
UBR1-201ENST00000290650 MTFMTQ96DP5 389 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 GPR63Q9BZJ6 419 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 BPIFA1Q9NP55 256 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CASS4Q9NQ75 786 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SCHIP1Q9P0W5 487 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 SUN2Q9UH99 717 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 FAF1Q9UNN5 650 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CDYLQ9Y232 598 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 hCG_1818297A0A087WSY0 165 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 C9IYK1 514 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TBC1D12O60347 775 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 RHOBTB1O94844 696 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 GJA9P57773 515 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 GBE1Q04446 702 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 COL9A2Q14055 689 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 THEMIS2Q5TEJ8 643 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 OVOS1Q6IE37 1185 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLC39A4Q6P5W5 647 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SCIMPQ6UWF3 145 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 LDB1Q86U70 411 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 PIGZQ86VD9 579 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TEX9Q8N6V9 391 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 C1orf127Q8N9H9 656 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SNX19Q92543 992 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ART4Q93070 314 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TINF2Q9BSI4 451 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TUBB6Q9BUF5 446 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 UPF3AQ9H1J1 476 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 PIDD1Q9HB75 910 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PCYOX1Q9UHG3 505 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SNCAIPQ9Y6H5 919 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MYPNQ86TC9 1320 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SIPA1L3O60292 1781 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 KRT16P08779 473 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 KPNA2P52292 529 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 MARSP56192 900 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 YWHAZP63104 245 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 DDX39BQ13838 428 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 KYAT1Q16773 422 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ZPBP2Q6X784 338 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLC26A11Q86WA9 606 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms