RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PROCP04070 461 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ATICP31939 592 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ICAM3P32942 547 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 NDUFV1P49821 464 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 TKTL1P51854 596 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 PRPSAP1Q14558 356 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 PLEKHG4Q58EX7 1191 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 LAYNQ6UX15 382 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 OR6P1Q8NGX9 317 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 PPWD1Q96BP3 646 aaKnown RBP16.37■□□□□ 0.21
SMAD6-201ENST00000288840 LRMDAQ9H2I8 198 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 YY1AP1Q9H869 796 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ITGA11Q9UKX5 1188 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
SMAD6-201ENST00000288840 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 PHGDHO43175 533 aaKnown RBP16.37■□□□□ 0.21
SMAD6-201ENST00000288840 AP1G2O75843 785 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ARL13BQ3SXY8 428 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 MOCOSQ96EN8 888 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 MARK4Q96L34 752 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 PNPOQ9NVS9 261 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 KPNA7A9QM74 516 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 GSC2O15499 205 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 SLC1A6P48664 564 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 TAF6P49848 677 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 BCAT1P54687 386 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 DGKDQ16760 1214 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 IZUMO2Q6UXV1 221 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 TTC30AQ86WT1 665 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 FSD1LQ9BXM9 530 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 FZD8Q9H461 694 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 CYP4F12Q9HCS2 524 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 ADA2Q9NZK5 511 aa16.37■□□□□ 0.21
SMAD6-201ENST00000288840 TCEA3O75764 348 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 PIGRP01833 764 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 RALBP11234 206 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 ALADP13716 330 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 GCAP28676 217 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 BST2Q10589 180 aaKnown RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 POU6F1Q14863 301 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 STILQ15468 1287 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 KRT82Q9NSB4 513 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 SPATS2LQ9NUQ6 558 aaKnown RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 TAS2R1Q9NYW7 299 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 CHADO15335 359 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 FGFR1P11362 822 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 TARBP2Q15633 366 aaKnown RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 CMASQ8NFW8 434 aaPredicted RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 ZNF570Q96NI8 536 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 TYROBPO43914 113 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 USP17L7P0C7H9 530 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 PDK1Q15118 436 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 WSCD1Q658N2 575 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 DEFB107AQ8IZN7 70 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 GALNT4Q8N4A0 578 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 ZNF560Q96MR9 790 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 EBNA1BP2Q99848 306 aaKnown RBP16.36■□□□□ 0.21
SMAD6-201ENST00000288840 TRIM4Q9C037 500 aa16.36■□□□□ 0.21
SMAD6-201ENST00000288840 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 DNAJC6O75061 913 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 HMBSP08397 361 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 CASP2P42575 452 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 SERPINB9P50453 376 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 EFHC1Q5JVL4 640 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 DRICH1Q6PGQ1 229 aaPredicted RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 PLPPR4Q7Z2D5 763 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 RBM15BQ8NDT2 890 aaKnown RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 INPP5DQ92835 1189 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 VCX3BQ9H321 246 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 RREB1Q92766 1687 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 CRCPO75575 148 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 SLC26A2P50443 739 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 ZNF132P52740 706 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 RIPK1Q13546 671 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 LRRC74BQ6ZQY2 392 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 SPATA24Q86W54 205 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 RAB3IL1Q8TBN0 382 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 FRMD8P1Q9BZ68 369 aaPredicted RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 ADGRA2Q96PE1 1338 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 SMAPO00193 183 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 CPA3P15088 417 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 NUDT2P50583 147 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
SMAD6-201ENST00000288840 GSTCDQ8NEC7 633 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 RNF139Q8WU17 664 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 CSPG4P5Q96PW8 444 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 BATF3Q9NR55 127 aa16.35■□□□□ 0.21
SMAD6-201ENST00000288840 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms