RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PCDHGA2Q9Y5H1 932 aa26.14■■□□□ 1.78
PDF-201ENST00000288022 ATG2BQ96BY7 2078 aa26.14■■□□□ 1.77
PDF-201ENST00000288022 GOLGA6L7A0A1B0GV03 622 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 K7ESF4 209 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 CYP1A1P04798 512 aaPredicted RBP26.13■■□□□ 1.77
PDF-201ENST00000288022 TDGF1P13385 188 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 ZC3H12AQ5D1E8 599 aaKnown RBP26.13■■□□□ 1.77
PDF-201ENST00000288022 EMC10Q5UCC4 262 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 LRSAM1Q6UWE0 723 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 MMS22LQ6ZRQ5 1243 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 SLC30A5Q8TAD4 765 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 BAP1Q92560 729 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 RNF34Q969K3 372 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 TMA16Q96EY4 203 aaKnown RBP26.13■■□□□ 1.77
PDF-201ENST00000288022 SLC39A13Q96H72 371 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 DDX50Q9BQ39 737 aaKnown RBP26.13■■□□□ 1.77
PDF-201ENST00000288022 MYO6Q9UM54 1294 aa26.13■■□□□ 1.77
PDF-201ENST00000288022 LRRC53A6NM62 1247 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 IGLV3-25P01717 112 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 DMC1Q14565 340 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 RFWD3Q6PCD5 774 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 SYT13Q7L8C5 426 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 ALLCQ8N6M5 410 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 AZIN2Q96A70 460 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 AGPAT1Q99943 283 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 ZDHHC4Q9NPG8 344 aa26.12■■□□□ 1.77
PDF-201ENST00000288022 KLF8O95600 359 aaPredicted RBP26.11■■□□□ 1.77
PDF-201ENST00000288022 CISD3P0C7P0 127 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 NOS2P35228 1153 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 SCNN1AP37088 669 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 MATKP42679 507 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 NSFP46459 744 aaKnown RBP26.11■■□□□ 1.77
PDF-201ENST00000288022 FNTBP49356 437 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 DMWDQ09019 674 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 NME3Q13232 169 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 ZNF513Q8N8E2 541 aaPredicted RBP26.11■■□□□ 1.77
PDF-201ENST00000288022 NELL1Q92832 810 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 NKD2Q969F2 451 aaPredicted RBP26.11■■□□□ 1.77
PDF-201ENST00000288022 HHIPQ96QV1 700 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 PCDHB18PQ96TA0 734 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 C11orf70Q9BRQ4 267 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.11■■□□□ 1.77
PDF-201ENST00000288022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.11■■□□□ 1.77
PDF-201ENST00000288022 IFNKQ9P0W0 207 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 SLC12A6Q9UHW9 1150 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 FBXO10Q9UK96 956 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 STAP1Q9ULZ2 295 aa26.11■■□□□ 1.77
PDF-201ENST00000288022 PROB1E7EW31 1015 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 SLC2A3P11169 496 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 HOXC13P31276 330 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 SLC6A4P31645 630 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 KIR2DL1P43626 348 aaPredicted RBP26.1■■□□□ 1.77
PDF-201ENST00000288022 ASIC2Q16515 512 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 CLEC16AQ2KHT3 1053 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 FAM133BQ5BKY9 247 aaKnown RBP26.1■■□□□ 1.77
PDF-201ENST00000288022 NADSYN1Q6IA69 706 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 ATP6V0D2Q8N8Y2 350 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 TXNDC5Q8NBS9 432 aaKnown RBP26.1■■□□□ 1.77
PDF-201ENST00000288022 ZBTB44Q8NCP5 570 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 RRN3Q9NYV6 651 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 MMP17Q9ULZ9 603 aa26.1■■□□□ 1.77
PDF-201ENST00000288022 TYW5A2RUC4 315 aaKnown RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 M0QYT0 321 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 TBL1XO60907 577 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 UNGP13051 313 aaPredicted RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 ABCB4P21439 1286 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 MMP8P22894 467 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 HOXD9P28356 352 aaPredicted RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 CCR1P32246 355 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 PXNP49023 591 aaPredicted RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 SULT1E1P49888 294 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 MRE11P49959 708 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 SGSHP51688 502 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 HSF5Q4G112 596 aaPredicted RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 PIK3R6Q5UE93 754 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 SFMBT2Q5VUG0 894 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 PHLDB2Q86SQ0 1253 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 ALYREFQ86V81 257 aaKnown RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 IL17RCQ8NAC3 791 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 BTN2A3PQ96KV6 586 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 SLC2A11Q9BYW1 496 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 XPO7Q9UIA9 1087 aaKnown RBP26.09■■□□□ 1.77
PDF-201ENST00000288022 CLEC4EQ9ULY5 219 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 SLC27A6Q9Y2P4 619 aa26.09■■□□□ 1.77
PDF-201ENST00000288022 PRRT4C9JH25 899 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 GFRA2O00451 464 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 CENPCQ03188 943 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 EOGTQ5NDL2 527 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 TRMT11Q7Z4G4 463 aaKnown RBP26.08■■□□□ 1.77
PDF-201ENST00000288022 IRF2BP2Q7Z5L9 587 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 LONP2Q86WA8 852 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 CHSY1Q86X52 802 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 CAMKK1Q8N5S9 505 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 HJURPQ8NCD3 748 aaPredicted RBP26.08■■□□□ 1.77
PDF-201ENST00000288022 RNF214Q8ND24 703 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 NUP58Q9BVL2 599 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 EDEM3Q9BZQ6 932 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 NUCKS1Q9H1E3 243 aaKnown RBP26.08■■□□□ 1.77
PDF-201ENST00000288022 SEMA4AQ9H3S1 761 aa26.08■■□□□ 1.77
PDF-201ENST00000288022 METTL5Q9NRN9 209 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms