RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 PNPLA8Q9NP80 782 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 AGO1Q9UL18 857 aaKnown RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 URB1O60287 2271 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 PLK4O00444 970 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 STX6O43752 255 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 FSBPO95073 299 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 ASS1P00966 412 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 CYBBP04839 570 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 RPN1P04843 607 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 ITPKBP27987 946 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 GRIA4P48058 902 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 CLDN6P56747 220 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 COG7P83436 770 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 CAMK2GQ13555 558 aaPredicted RBP11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 SHC4Q6S5L8 630 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 SV2AQ7L0J3 742 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 TAF4BQ92750 862 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 IGSF8Q969P0 613 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 BIRC7Q96CA5 298 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 DCLK3Q9C098 648 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
NSMCE2-201ENST00000287437 SLC12A8A0AV02 714 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 SPTLC2O15270 562 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 PCDHGA12O60330 932 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 C1QL1O75973 258 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 SEMA4FO95754 770 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CD58P19256 250 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 INCA1Q0VD86 236 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 C19orf57Q0VDD7 668 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CUL4BQ13620 913 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 E2F5Q15329 346 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 FNDC3BQ53EP0 1204 aaKnown RBP11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CPXM2Q8N436 756 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 ENGASEQ8NFI3 743 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 GOLGA5Q8TBA6 731 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CYB5D2Q8WUJ1 264 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CDK5RAP1Q96SZ6 601 aaKnown RBP11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 SLC2A11Q9BYW1 496 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 BTBD1Q9H0C5 482 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 APOBEC3GQ9HC16 384 aaKnown RBP11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 OSGEPQ9NPF4 335 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 DMAC2Q9NW81 257 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 MARCH2Q9P0N8 246 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 FTSJ1Q9UET6 329 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
NSMCE2-201ENST00000287437 MYH10P35580 1976 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 CBX4O00257 560 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 POLR2DO15514 142 aaKnown RBP11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 TIMM44O43615 452 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 TSPAN3O60637 253 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 PPP6R2O75170 966 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 CD27P26842 260 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 HOXD9P28356 352 aaPredicted RBP11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 HLA-FP30511 346 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 CTSKP43235 329 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 AFMP43652 599 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 PRAMEF14Q5SWL7 426 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 ADAT2Q7Z6V5 191 aaKnown RBP11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 TMPRSS12Q86WS5 348 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 GATAD2AQ86YP4 633 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 FAM217AQ8IXS0 508 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 ARID3AQ99856 593 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 ORAI3Q9BRQ5 295 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 DUSP16Q9BY84 665 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 TMEM245Q9H330 911 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 TMEM131Q92545 1883 aa11.23□□□□□ -0.61
NSMCE2-201ENST00000287437 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 MUC22E2RYF6 1773 aaPredicted RBP11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 E9PAM4 449 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 TLX3O43711 291 aaPredicted RBP11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 DNTTP04053 509 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 NR3C1P04150 777 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 BCAT1P54687 386 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 YWHAGP61981 247 aaKnown RBP eCLIP11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 RPS14P62263 151 aaKnown RBP11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 SEMG2Q02383 582 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 STK4Q13043 487 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 DNAJC3Q13217 504 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 NUMA1Q14980 2115 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 INAVAQ3KP66 663 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 ZNF394Q53GI3 561 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 CHST9Q7L1S5 443 aa11.22□□□□□ -0.61
NSMCE2-201ENST00000287437 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms