RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MTMR8Q96EF0 704 aa19.02■□□□□ 0.63
PCDH1-201ENST00000287008 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.63
PCDH1-201ENST00000287008 KIF1AQ12756 1690 aa19.02■□□□□ 0.63
PCDH1-201ENST00000287008 EIF3HO15372 352 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 EFCAB14O75071 495 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 TRUB2O95900 331 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CYP2C18P33260 490 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CDC16Q13042 620 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 DGKZQ13574 1117 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 TRMT11Q7Z4G4 463 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CACUL1Q86Y37 369 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 PAFAH2Q99487 392 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 ACO2Q99798 780 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 HSD17B14Q9BPX1 270 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 THUMPD3Q9BV44 507 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 SHCBP1LQ9BZQ2 653 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CD151P48509 253 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CNTN1Q12860 1018 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 FLOT2Q14254 428 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CSHL1Q14406 222 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 KBTBD12Q3ZCT8 623 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 OTOAQ7RTW8 1153 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 STX19Q8N4C7 294 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 TSEN34Q9BSV6 310 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CDC42EP4Q9H3Q1 356 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 RNPEPQ9H4A4 650 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CAPN10Q9HC96 672 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 SPG21Q9NZD8 308 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 NCKIPSDQ9NZQ3 722 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 ZBTB48P10074 688 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 MAPK1P28482 360 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 FNDC3BQ53EP0 1204 aaKnown RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 ELNP15502 786 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 TGM3Q08188 693 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 TPGS1Q6ZTW0 290 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 ILDR1Q86SU0 546 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CCDC3Q9BQI4 270 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 MFSD1Q9H3U5 465 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 GIT1Q9Y2X7 761 aa19.01■□□□□ 0.63
PCDH1-201ENST00000287008 CHKAP35790 457 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 PSEN1P49768 467 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 RTP1P59025 263 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 ITGA7Q13683 1181 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 KCNT2Q6UVM3 1135 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 NECAB2Q7Z6G3 386 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 CAPNS2Q96L46 248 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 ELOVL6Q9H5J4 265 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 FAM153AQ9UHL3 310 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 ERVK-10P10266 1014 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 HALP42357 657 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 CASP5P51878 434 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 C1QTNF7Q9BXJ2 289 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 GANQ9H2C0 597 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 TRAV19A0A0A6YYK7 116 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 FGFR1P11362 822 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 HLA-DPA1P20036 260 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 ARMC12Q5T9G4 340 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 EME1Q96AY2 570 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 C18orf25Q96B23 403 aaPredicted RBP19■□□□□ 0.63
PCDH1-201ENST00000287008 HIPK3Q9H422 1215 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 RNF103O00237 685 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 DGKIO75912 1065 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 TPH1P17752 444 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 TCN1P20061 433 aaPredicted RBP19■□□□□ 0.63
PCDH1-201ENST00000287008 PIGZQ86VD9 579 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 PPTC7Q8NI37 304 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 LPPQ93052 612 aa19■□□□□ 0.63
PCDH1-201ENST00000287008 XRN2Q9H0D6 950 aaKnown RBP eCLIP19■□□□□ 0.63
PCDH1-201ENST00000287008 ERI2A8K979 691 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 TPBGLP0DKB5 382 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 FBXL19Q6PCT2 694 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 B3GALNT2Q8NCR0 500 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 KAT5Q92993 513 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 FAM105AQ9NUU6 356 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 SLC24A2Q9UI40 661 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 MGAT4DA6NG13 374 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 CYP2A6P11509 494 aaPredicted RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 SERPINA4P29622 427 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 CNGA3Q16281 694 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 PRPF39Q86UA1 669 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 SUGP1Q8IWZ8 645 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 TNIP2Q8NFZ5 429 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 CORO1BQ9BR76 489 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 CTNNAL1Q9UBT7 734 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 DMGDHQ9UI17 866 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 RAD54BQ9Y620 910 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 F8VP50 259 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 DARSP14868 501 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 RFX3P48380 749 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 ILF2Q12905 390 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 HSDL1Q3SXM5 330 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 EEF1DP3Q658K8 133 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 TRPM8Q7Z2W7 1104 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 SH3RF1Q7Z6J0 888 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 SYTL1Q8IYJ3 562 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 NLGN2Q8NFZ4 835 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 EPS8L1Q8TE68 723 aa18.99■□□□□ 0.63
PCDH1-201ENST00000287008 HNRNPLLQ8WVV9 542 aaKnown RBP18.99■□□□□ 0.63
PCDH1-201ENST00000287008 POLR1EQ9GZS1 481 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms