RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MSH2P43246 934 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 YWHAHQ04917 246 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 SPARCL1Q14515 664 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 SLC39A12Q504Y0 691 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 PRPF39Q86UA1 669 aaKnown RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 CACNA2D3Q8IZS8 1091 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 HTR3CQ8WXA8 447 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 TKTL2Q9H0I9 626 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 KIAA0100Q14667 2235 aaKnown RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 TCRBV9S1A1TA0A576 114 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 BCLAF3A2AJT9 711 aaKnown RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 MSI1O43347 362 aaKnown RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 KRT4P19013 534 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 ADRA1BP35368 520 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 TPI1P60174 286 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 CLLU1OSQ5K130 101 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 PPP1R21Q6ZMI0 780 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 TRABD2AQ86V40 505 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 PPM1NQ8N819 430 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 CELF6Q96J87 481 aaKnown RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 ZNF317Q96PQ6 595 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 WDCPQ9H6R7 721 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 CNGB3Q9NQW8 809 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 PSMC3IPQ9P2W1 217 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-201ENST00000279247 SFMBT1Q9UHJ3 866 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 IKBKGQ9Y6K9 419 aa18.54■□□□□ 0.56
CAPN1-201ENST00000279247 MOCS2O96007 188 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ERCC2P18074 760 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ATN1P54259 1190 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 TSPY1Q01534 308 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 RWDD4Q6NW29 188 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 RFX8Q6ZV50 586 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SPATA2LQ8IUW3 424 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 PDCD7Q8N8D1 485 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SMC6Q96SB8 1091 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ZC3H7BQ9UGR2 993 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 LGALS13Q9UHV8 139 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 TTLL3Q9Y4R7 772 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 RANBP2P49792 3224 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 NT5C1B-RDH14C9J2C7 533 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 HHLA1C9JL84 531 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ATP2A2P16615 1042 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ZFXP17010 805 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 RPA3P35244 121 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SCNN1AP37088 669 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SESN2P58004 480 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 RPAINQ86UA6 219 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 CAND1Q86VP6 1230 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 THEM5Q8N1Q8 247 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 LINC01599Q8WXQ3 324 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SPOCK2Q92563 424 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 SLC2A13Q96QE2 648 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 ALG13Q9NP73 1137 aaKnown RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 DMAP1Q9NPF5 467 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-201ENST00000279247 USP3Q9Y6I4 520 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 CDH23Q9H251 3354 aa18.53■□□□□ 0.56
CAPN1-201ENST00000279247 CFAP69A5D8W1 941 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 RNF103O00237 685 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 TCEA3O75764 348 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 SOAT2O75908 522 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 CST5P28325 142 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-201ENST00000279247 GPR15P49685 360 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 ANKRD20A2Q5SQ80 823 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 ANKRD20A1Q5TYW2 823 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 ANKRD20A3Q5VUR7 823 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 TAC4Q86UU9 113 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 OTUD6BQ8N6M0 293 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 P2RY11Q96G91 374 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 ACBD6Q9BR61 282 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 COLEC11Q9BWP8 271 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 WDR6Q9NNW5 1121 aaKnown RBP18.52■□□□□ 0.56
CAPN1-201ENST00000279247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-201ENST00000279247 CHADO15335 359 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 USP12O75317 370 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 EPHB2P29323 1055 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 DDR2Q16832 855 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 COLGALT1Q8NBJ5 622 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 TGS1Q96RS0 853 aaKnown RBP18.52■□□□□ 0.56
CAPN1-201ENST00000279247 EURLQ9NYK6 297 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 PDE4DIPQ5VU43 2346 aa18.52■□□□□ 0.56
CAPN1-201ENST00000279247 SHROOM3Q8TF72 1996 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 CASP8AP2Q9UKL3 1982 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 NDC80O14777 642 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 FBXO21O94952 628 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 CPP00450 1065 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 SLC24A5Q71RS6 500 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 ARCQ7LC44 396 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 PID1Q7Z2X4 250 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 QKIQ96PU8 341 aaKnown RBP eCLIP18.52■□□□□ 0.556e-6■■■■□ 20.5
CAPN1-201ENST00000279247 BEGAINQ9BUH8 593 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 IL1RAPL1Q9NZN1 696 aa18.52■□□□□ 0.55
CAPN1-201ENST00000279247 FAM47DPA6NHR8 397 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 ZNF598Q86UK7 904 aaKnown RBP18.51■□□□□ 0.55
CAPN1-201ENST00000279247 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-201ENST00000279247 UNC5BQ8IZJ1 945 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 NT5C3BQ969T7 300 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 CENPTQ96BT3 561 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms