RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZNF135P52742 658 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-201ENST00000277575 TRIP10Q15642 601 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 TMC3Q7Z5M5 1100 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 B3GALNT2Q8NCR0 500 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 LNX1Q8TBB1 728 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-201ENST00000277575 FAR2Q96K12 515 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 ABCC13Q9NSE7 274 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 SPTLC1O15269 473 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 CKBP12277 381 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 CD52P31358 61 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 CD151P48509 253 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 FMO1Q01740 532 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 FBXW10Q5XX13 1052 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 FAM84AQ96KN4 292 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 CEP19Q96LK0 163 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 VAT1Q99536 393 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 SLIT3O75094 1523 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 MGAT1P26572 445 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 FBXW4P57775 412 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 BTKQ06187 659 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 LRRN4CLQ8ND94 238 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 OR12D3Q9UGF7 316 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 IPPQ9Y573 584 aa11.57□□□□□ -0.56
USP6NL-201ENST00000277575 HACD1B0YJ81 288 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 BTBD19C9JJ37 291 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 USP12O75317 370 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 VAPBO95292 243 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ZNF143P52747 638 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CCL23P55773 120 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ANKRD52Q8NB46 1076 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 OR9Q1Q8NGQ5 310 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 LPPQ93052 612 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ZNF333Q96JL9 665 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 GPR20Q99678 358 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 IKZF4Q9H2S9 585 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SPATS2LQ9NUQ6 558 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SAE1Q9UBE0 346 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 UXTQ9UBK9 157 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 DNAJC16Q9Y2G8 782 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 A0A0B4J269 797 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 AASDHQ4L235 1098 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NOMO2Q5JPE7 1267 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 LRRC38Q5VT99 294 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ICE2Q659A1 982 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ARMC6Q6NXE6 501 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 TRIM48Q8IWZ4 208 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 C12orf56Q8IXR9 622 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 PPTC7Q8NI37 304 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 YIPF2Q9BWQ6 316 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CDH9Q9ULB4 789 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SETD1AO15047 1707 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ERI2A8K979 691 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 TRIM66O15016 1216 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ATP5C1P36542 298 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NPY2RP49146 381 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NUDT2P50583 147 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 MARSP56192 900 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SFSWAPQ12872 951 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ATP13A4Q4VNC1 1196 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SEL1L3Q68CR1 1132 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 IRF2BP1Q8IU81 584 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NLGN2Q8NFZ4 835 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 C10orf88Q9H8K7 445 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CYP1A2P05177 515 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 TARSP26639 723 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 HNRNPH3P31942 346 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 GRM5P41594 1212 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NOMO3P69849 1222 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CYTH1Q15438 398 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
USP6NL-201ENST00000277575 AADACL2Q6P093 401 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 CES3Q6UWW8 571 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 LRRC52Q8N7C0 313 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 ECSITQ9BQ95 431 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 NINJ2Q9NZG7 142 aa11.56□□□□□ -0.56
USP6NL-201ENST00000277575 SF3B1O75533 1304 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP6NL-201ENST00000277575 WDR27A2RRH5 827 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 RBAK-RBAKDNI3L0D1 243 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 SYNCRIPO60506 623 aaKnown RBP11.55□□□□□ -0.56
USP6NL-201ENST00000277575 PFDN1O60925 122 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 SEC24DO94855 1032 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-201ENST00000277575 ZSCAN5DPP0CG00 497 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 CDH2P19022 906 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-201ENST00000277575 AQP5P55064 265 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 AMPD2Q01433 879 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 PLD1Q13393 1074 aa11.55□□□□□ -0.56
USP6NL-201ENST00000277575 MED21Q13503 144 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms