RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ATL3Q6DD88 541 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 PIGZQ86VD9 579 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 FAM217AQ8IXS0 508 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 ZC3H3Q8IXZ2 948 aaKnown RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 UBR7Q8N806 425 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 SORCS1Q8WY21 1168 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 MMRN2Q9H8L6 949 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 IL21RQ9HBE5 538 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 THAP10Q9P2Z0 257 aaPredicted RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 DNMT3LQ9UJW3 386 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 NAGPAQ9UK23 515 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 STON1Q9Y6Q2 735 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 KNL1Q8NG31 2342 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 BAHCC1Q9P281 2608 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 A0A1W2PQD8 194 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 FAM221BA6H8Z2 402 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 CALUO43852 315 aaPredicted RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 SH3BP5O60239 455 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 CBFA2T3O75081 653 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 P4HA1P13674 534 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 SGSHP51688 502 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 PMS1P54277 932 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 SIM1P81133 766 aaPredicted RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 EFEMP1Q12805 493 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 GRIK2Q13002 908 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 BYSLQ13895 437 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 ARHGAP17Q68EM7 881 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 INTS8Q75QN2 995 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 RAB44Q7Z6P3 723 aaPredicted RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 GUF1Q8N442 669 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 CHCHD4Q8N4Q1 142 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 XPO6Q96QU8 1125 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 ZSWIM1Q9BR11 485 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 CISHQ9NSE2 258 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 CLIC5Q9NZA1 410 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 RASAL2Q9UJF2 1139 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 LSM7Q9UK45 103 aaKnown RBP9.39□□□□□ -0.91
TPM3-201ENST00000271850 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 FRMD4BQ9Y2L6 1034 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 NEUROG3Q9Y4Z2 214 aa9.39□□□□□ -0.91
TPM3-201ENST00000271850 OPHN1O60890 802 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 ZNF217O75362 1048 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 IGLV3-19P01714 112 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 MYL1P05976 194 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 HLA-EP13747 358 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 HOXD9P28356 352 aaPredicted RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 CD6P30203 668 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 SYKP43405 635 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 TPMTP51580 245 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 GFPT1Q06210 699 aaPredicted RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 ENPEPQ07075 957 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 ADAM9Q13443 819 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 ZNF234Q14588 700 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 PREPLQ4J6C6 727 aaPredicted RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 KRT39Q6A163 491 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 KIAA1324Q6UXG2 1013 aaKnown RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 KRBA2Q6ZNG9 492 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 METTL3Q86U44 580 aaKnown RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 CACUL1Q86Y37 369 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 DENND1CQ8IV53 801 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 MYEOVQ96EZ4 313 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 TOE1Q96GM8 510 aaKnown RBP9.38□□□□□ -0.91
TPM3-201ENST00000271850 TMEM176AQ96HP8 235 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 ULBP1Q9BZM6 244 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 ITM2CQ9NQX7 267 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 USP25Q9UHP3 1055 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 APC2O95996 2303 aa9.38□□□□□ -0.91
TPM3-201ENST00000271850 SLC12A8A0AV02 714 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 MSI1O43347 362 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 CALCAP01258 141 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 NCAM1P13591 858 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 HLA-FP30511 346 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 PSMC2P35998 433 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 DPP6P42658 865 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 MXI1P50539 228 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 YWHAGP61981 247 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM3-201ENST00000271850 PDE4CQ08493 712 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 TRIP4Q15650 581 aaPredicted RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 PTPRNQ16849 979 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 SLCO6A1Q86UG4 719 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms