RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MYBL1P10243 752 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 SDC4P31431 198 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 SLC6A4P31645 630 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 CTHP32929 405 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 PTPN9P43378 593 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 CXCR3P49682 368 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 FAM133BQ5BKY9 247 aaKnown RBP13.25□□□□□ -0.29
SS18-202ENST00000269138 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 FAM217AQ8IXS0 508 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 BHMTQ93088 406 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 MYEOVQ96EZ4 313 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
SS18-202ENST00000269138 C8orf33Q9H7E9 229 aaPredicted RBP13.25□□□□□ -0.29
SS18-202ENST00000269138 TMPRSS4Q9NRS4 437 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.25□□□□□ -0.29
SS18-202ENST00000269138 STOML2Q9UJZ1 356 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 MTF2Q9Y483 593 aaPredicted RBP13.25□□□□□ -0.29
SS18-202ENST00000269138 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 MUC3AQ02505 3323 aa13.25□□□□□ -0.29
SS18-202ENST00000269138 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 GFRA2O00451 464 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 CCP110O43303 1012 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ENDOD1O94919 500 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ADH1CP00326 375 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 APOEP02649 317 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 H2AFZP0C0S5 128 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ADH5P11766 374 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 CCR1P32246 355 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 SLC6A11P48066 632 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 SLC11A2P49281 568 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 SGSHP51688 502 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ZNF143P52747 638 aaPredicted RBP13.24□□□□□ -0.29
SS18-202ENST00000269138 STARD6P59095 220 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 PRKCQQ04759 706 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 NR1H3Q13133 447 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ANO4Q32M45 955 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 ADGRF1Q5T601 910 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 H2AFVQ71UI9 128 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 C12orf40Q86WS4 652 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 FAM131BQ86XD5 332 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 CENPIQ92674 756 aaPredicted RBP13.24□□□□□ -0.29
SS18-202ENST00000269138 AZIN2Q96A70 460 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 FOXQ1Q9C009 403 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 TBC1D17Q9HA65 648 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 FBRSL1Q9HCM7 1045 aaKnown RBP13.24□□□□□ -0.29
SS18-202ENST00000269138 PLK2Q9NYY3 685 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 SNX10Q9Y5X0 201 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
SS18-202ENST00000269138 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 STK25O00506 426 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 LATS1O95835 1130 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 F9P00740 461 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 GLULP15104 373 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 CHKAP35790 457 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 GGCXP38435 758 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 OPRD1P41143 372 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 GALK1P51570 392 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 HDAC4P56524 1084 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 GAD2Q05329 585 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 MESP2Q0VG99 397 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 PON2Q15165 354 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 RAP1GAP2Q684P5 730 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 RAD9BQ6WBX8 426 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
SS18-202ENST00000269138 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 TMTC1Q8IUR5 882 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 CPXM2Q8N436 756 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 ATP6V0D2Q8N8Y2 350 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 FLCNQ8NFG4 579 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 FAM172AQ8WUF8 416 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 FAM3CQ92520 227 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 SHDQ96IW2 340 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 BAG1Q99933 345 aaPredicted RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 NUP85Q9BW27 656 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 TKTL2Q9H0I9 626 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 WDCPQ9H6R7 721 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 ARHGEF38Q9NXL2 777 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 TRIM24O15164 1050 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 PAGE1O75459 146 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 SLC2A3P11169 496 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 TYRP14679 529 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 PSMA2P25787 234 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 MRE11P49959 708 aa13.23□□□□□ -0.29
SS18-202ENST00000269138 MLLT6P55198 1093 aaPredicted RBP13.23□□□□□ -0.29
SS18-202ENST00000269138 PIK3R6Q5UE93 754 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms