RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 WFIKKN2Q8TEU8 576 aa14.87□□□□□ -0.03
COMMD4-201ENST00000267935 TMA16Q96EY4 203 aaKnown RBP14.87□□□□□ -0.03
COMMD4-201ENST00000267935 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
COMMD4-201ENST00000267935 FBRSQ9HAH7 460 aa14.87□□□□□ -0.03
COMMD4-201ENST00000267935 TM7SF3Q9NS93 570 aa14.87□□□□□ -0.03
COMMD4-201ENST00000267935 SUN2Q9UH99 717 aa14.87□□□□□ -0.03
COMMD4-201ENST00000267935 MAPK8IP1Q9UQF2 711 aa14.87□□□□□ -0.03
COMMD4-201ENST00000267935 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
COMMD4-201ENST00000267935 IGLV3-19P01714 112 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 ATP5BP06576 529 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 MXI1P50539 228 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 AFF3P51826 1226 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 RING1Q06587 406 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 SCAPQ12770 1279 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 SFSWAPQ12872 951 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 FNDC3BQ53EP0 1204 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 RAB41Q5JT25 222 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 PM20D1Q6GTS8 502 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 ZNF557Q8N988 423 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 SLC4A11Q8NBS3 891 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 RHBDD1Q8TEB9 315 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 CCDC86Q9H6F5 360 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 CD93Q9NPY3 652 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
COMMD4-201ENST00000267935 KIAA1257Q9ULG3 409 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 HPSEQ9Y251 543 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 PCDHGB2Q9Y5G2 931 aa14.86□□□□□ -0.03
COMMD4-201ENST00000267935 KCNJ18B7U540 433 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 RAD23BP54727 409 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 ZBTB16Q05516 673 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 TRIP4Q15650 581 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-201ENST00000267935 HLA-BQ31612 363 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 SGO2Q562F6 1265 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 CCNI2Q6ZMN8 369 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-201ENST00000267935 PROSER1Q86XN7 944 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 FMNL3Q8IVF7 1028 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 SNX19Q92543 992 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 GOLGA1Q92805 767 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 ARID3AQ99856 593 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 IRX2Q9BZI1 471 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-201ENST00000267935 LHX5Q9H2C1 402 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 PCOLCE2Q9UKZ9 415 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 FRYQ5TBA9 3013 aa14.85□□□□□ -0.03
COMMD4-201ENST00000267935 XPO1O14980 1071 aaKnown RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 FLRT2O43155 660 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 LATS1O95835 1130 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 PRKCHP24723 683 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 BCAT1P54687 386 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 MCCD1P59942 119 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 DPYDQ12882 1025 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 CAMK2GQ13555 558 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 COL9A2Q14055 689 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 BSPRYQ5W0U4 402 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 FAM124AQ86V42 546 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 FAM217AQ8IXS0 508 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 AHI1Q8N157 1196 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 SEMA4DQ92854 862 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 SKA1Q96BD8 255 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 TSG101Q99816 390 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 ULBP1Q9BZM6 244 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 SCAND2PQ9GZW5 306 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-201ENST00000267935 BTBD1Q9H0C5 482 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 NCKAP1Q9Y2A7 1128 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 IGF2RP11717 2491 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 PCDH15Q96QU1 1955 aa14.84□□□□□ -0.03
COMMD4-201ENST00000267935 DFNA5O60443 496 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 TSPAN3O60637 253 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 CBFA2T3O75081 653 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 DNTTP04053 509 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 VDRP11473 427 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 CD19P15391 556 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 POLR2EP19388 210 aaKnown RBP14.83□□□□□ -0.04
COMMD4-201ENST00000267935 CSNK1EP49674 416 aaKnown RBP14.83□□□□□ -0.04
COMMD4-201ENST00000267935 NDUFA8P51970 172 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 COPAP53621 1224 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 BST2Q10589 180 aaKnown RBP14.83□□□□□ -0.04
COMMD4-201ENST00000267935 GOLGA7BQ2TAP0 167 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 TTC31Q49AM3 519 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-201ENST00000267935 TCERG1LQ5VWI1 586 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 CHST9Q7L1S5 443 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 GALNT15Q8N3T1 639 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 SORCS1Q8WY21 1168 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 TATDN2Q93075 761 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 DDX50Q9BQ39 737 aaKnown RBP14.83□□□□□ -0.04
COMMD4-201ENST00000267935 OSGEPQ9NPF4 335 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 RMND1Q9NWS8 449 aa14.83□□□□□ -0.04
COMMD4-201ENST00000267935 FAM237AA0A1B0GTK4 181 aa14.82□□□□□ -0.04
COMMD4-201ENST00000267935 A0A1B0GVT2 93 aa14.82□□□□□ -0.04
COMMD4-201ENST00000267935 TYW5A2RUC4 315 aaKnown RBP14.82□□□□□ -0.04
COMMD4-201ENST00000267935 RNASEH1O60930 286 aaKnown RBP14.82□□□□□ -0.04
COMMD4-201ENST00000267935 SLC11A2P49281 568 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms