RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 ATP2A2P16615 1042 aaKnown RBP25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 STIP1P31948 543 aaKnown RBP25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 ADCY8P40145 1251 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 RASIP1Q5U651 963 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 RFX8Q6ZV50 586 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 GLIS1Q8NBF1 620 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 BBOF1Q8ND07 529 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 HAPLN3Q96S86 360 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 UBE2OQ9C0C9 1292 aaKnown RBP25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 HEY1Q9Y5J3 304 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 FAM72CH0Y354 149 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 TP73O15350 636 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 RARGP13631 454 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 DNAJB2P25686 324 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 XRCC4Q13426 336 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 FAM72AQ5TYM5 149 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 FAM72DQ6L9T8 149 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 FAM72BQ86X60 149 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 KLHL23Q8NBE8 558 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 RSAD2Q8WXG1 361 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 AUTS2Q8WXX7 1259 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 OVCA2Q8WZ82 227 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 MTIF3Q9H2K0 278 aaKnown RBP25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 CYP4F11Q9HBI6 524 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 NUDT5Q9UKK9 219 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 TLR6Q9Y2C9 796 aa25.31■■□□□ 1.64
R3HCC1-201ENST00000265806 MSI1O43347 362 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 HSPA9P38646 679 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 CAV1Q03135 178 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 ZC3H18Q86VM9 953 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 ZNF276Q8N554 614 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 LRRC45Q96CN5 670 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 ETNK2Q9NVF9 386 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 FAM53CQ9NYF3 392 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 MTRF1LQ9UGC7 380 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 OR12D3Q9UGF7 316 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 HPCAL4Q9UM19 191 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 YIPF1Q9Y548 306 aa25.3■■□□□ 1.64
R3HCC1-201ENST00000265806 TLL1O43897 1013 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 CSH1P0DML2 217 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 CSH2P0DML3 217 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 TPI1P60174 286 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 GBE1Q04446 702 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 DARS2Q6PI48 645 aaKnown RBP25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 RHBDF2Q6PJF5 856 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 BZW1Q7L1Q6 419 aaKnown RBP25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 UNC45BQ8IWX7 931 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 TCEAL8Q8IYN2 117 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 SLC39A13Q96H72 371 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 EPAS1Q99814 870 aa25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 ZMYND8Q9ULU4 1186 aaPredicted RBP25.29■■□□□ 1.64
R3HCC1-201ENST00000265806 BCLAF3A2AJT9 711 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 CFAP69A5D8W1 941 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 KCNU1A8MYU2 1149 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 H7C0C1 242 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 DCLK1O15075 740 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 TEX28O15482 410 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 ALDH1A3P47895 512 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 ATP5OP48047 213 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 VPS41P49754 854 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 GDF10P55107 478 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 SLC10A2Q12908 348 aaPredicted RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 PAFAH1B3Q15102 231 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 PRUNE1Q86TP1 453 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 PDZD8Q8NEN9 1154 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 MYRFLQ96LU7 910 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 C10orf88Q9H8K7 445 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 DTLQ9NZJ0 730 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 MAGED2Q9UNF1 606 aaPredicted RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 IFNB1P01574 187 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 ZSCAN5DPP0CG00 497 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 SLC2A3P11169 496 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 HMGA1P17096 107 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 SNX30Q5VWJ9 437 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 TMC3Q7Z5M5 1100 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 TSEN2Q8NCE0 465 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 RTP4Q96DX8 246 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 LBHD1Q9BQE6 289 aaPredicted RBP25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 USP29Q9HBJ7 922 aa25.28■■□□□ 1.64
R3HCC1-201ENST00000265806 ETS1P14921 441 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 ELF1P32519 619 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 HTR7P34969 479 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 ITGA8P53708 1063 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 OLFM3Q96PB7 478 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 CDK5RAP1Q96SZ6 601 aaKnown RBP25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 TXLNGYQ9BZA5 131 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 LZTS1Q9Y250 596 aa25.27■■□□□ 1.64
R3HCC1-201ENST00000265806 LCHNA4D1U4 455 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 DNALI1O14645 258 aaPredicted RBP25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 NDC80O14777 642 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 PAGE1O75459 146 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 LRIG2O94898 1065 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 ERCC2P18074 760 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 BMPR1AP36894 532 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 EFEMP1Q12805 493 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 P3H1Q32P28 736 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 IZUMO3Q5VZ72 239 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 CDKL3Q8IVW4 592 aaPredicted RBP25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 FAM71DQ8N9W8 422 aa25.26■■□□□ 1.63
R3HCC1-201ENST00000265806 TRMT2BQ96GJ1 504 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms