RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TICAM1Q8IUC6 712 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 KYQ8NBH2 561 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC7A3Q8WY07 619 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SIGLEC10Q96LC7 697 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 PLAC1Q9HBJ0 212 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 APOL1O14791 398 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ATG7O95352 703 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CD19P15391 556 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 KCNA4P22459 653 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 HSPA1LP34931 641 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 BCAR1P56945 870 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 LPIN1Q14693 890 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CCDC153Q494R4 210 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 XKR3Q5GH77 459 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ARHGEF16Q5VV41 709 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 IYDQ6PHW0 289 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 BNC2Q6ZN30 1099 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 XYLT1Q86Y38 959 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 MMP19Q99542 508 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 VPS33BQ9H267 617 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 FAF1Q9UNN5 650 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 BTAF1O14981 1849 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 POLRMTO00411 1230 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PRPSAP2O60256 369 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 H2AFYO75367 372 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CAPNS1P04632 268 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PSMC3P17980 439 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CDH2P19022 906 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CCND2P30279 289 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ADSLP30566 484 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CDK9P50750 372 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 NRLP54845 237 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 EMP3P54852 163 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 NUP107P57740 925 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 MYL6P60660 151 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PCLAFQ15004 111 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 C16orf46Q6P387 395 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 EPGNQ6UW88 154 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 TRIML2Q8N7C3 387 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PLD5Q8N7P1 536 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ZBTB45Q96K62 511 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 SORT1Q99523 831 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 SHCBP1LQ9BZQ2 653 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PLGRKTQ9HBL7 147 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 RIMS3Q9UJD0 308 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 BLOC1S6Q9UL45 172 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 EMCNQ9ULC0 261 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 CEPT1Q9Y6K0 416 aa12.75□□□□□ -0.37
CHMP2B-201ENST00000263780 ADGRA2Q96PE1 1338 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF195O14628 629 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ATP6V1G1O75348 118 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF23P17027 643 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 RBL1P28749 1068 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC5A2P31639 672 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 GALK1P51570 392 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 HK2P52789 917 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 EMC2Q15006 297 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 C10orf107Q8IVU9 208 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 EMC1Q8N766 993 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 RP9Q8TA86 221 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 MCRS1Q96EZ8 462 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ADPGKQ9BRR6 497 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 TARS2Q9BW92 718 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 HAPLN2Q9GZV7 340 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 CDH19Q9H159 772 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 COPG2Q9UBF2 871 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 LRRIQ4A6NIV6 560 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 TMEM114B3SHH9 223 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 E9PBE3 544 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms