RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MCF2LO15068 1137 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 AMPD1P23109 780 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 RPL21P46778 160 aaKnown RBP23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 HCAR3P49019 387 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 EIF3EP60228 445 aaKnown RBP23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 ERVFC1P60507 584 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 DPYSQ14117 519 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 NCBP2-AS2Q69YL0 99 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 C1orf228Q6PIY5 440 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 HAPLN3Q96S86 360 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 TCF25Q9BQ70 676 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 C17orf80Q9BSJ5 609 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 GRHL1Q9NZI5 618 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 SNX24Q9Y343 169 aa23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 KCNU1A8MYU2 1149 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 EEF2KO00418 725 aaKnown RBP23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 TGM5O43548 720 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 CREB3O43889 395 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 ARHGEF15O94989 841 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 KLRC2P26717 231 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 CA8P35219 290 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 TWF1Q12792 350 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 VEPH1Q14D04 833 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 LILRA6Q6PI73 481 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 RFX8Q6ZV50 586 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 SPPL3Q8TCT6 385 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 KLHL5Q96PQ7 755 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 NEUROG2Q9H2A3 272 aa23.7■■□□□ 1.38
SMARCB1-201ENST00000263121 MYOGP15173 224 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 MAGEA10P43363 369 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 UBE3AQ05086 875 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 EFEMP1Q12805 493 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 HLTFQ14527 1009 aaKnown RBP eCLIP23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 EMBQ6PCB8 327 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 FCRL2Q96LA5 508 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 TMEM121Q9BTD3 319 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 ETNK2Q9NVF9 386 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 OR12D3Q9UGF7 316 aa23.69■■□□□ 1.38
SMARCB1-201ENST00000263121 TBX18O95935 607 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 KRT14P02533 472 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 ADH1AP07327 375 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 RBP3P10745 1247 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 DNAJB1P25685 340 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 IVDP26440 423 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 NR2C2P49116 596 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 TRIP4Q15650 581 aaPredicted RBP23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 C10orf120Q5SQS8 335 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 FAM109BQ6ICB4 259 aaPredicted RBP23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 GSTA5Q7RTV2 222 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 SPRED2Q7Z698 418 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 POF1BQ8WVV4 589 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 CAVIN3Q969G5 261 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 EPAS1Q99814 870 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 CCSER2Q9H7U1 834 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 ENTPD7Q9NQZ7 604 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 ZDHHC18Q9NUE0 388 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 MARCH2Q9P0N8 246 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 ASIC3Q9UHC3 531 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 HEY1Q9Y5J3 304 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 SNX10Q9Y5X0 201 aa23.68■■□□□ 1.38
SMARCB1-201ENST00000263121 ZNF840PA6NDX5 716 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 GRXCR1A8MXD5 290 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 DCLK1O15075 740 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 TLR5O60602 858 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 PAGE1O75459 146 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 SLC2A3P11169 496 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 EPHB3P54753 998 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 TBX4P57082 545 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 TPI1P60174 286 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 GBE1Q04446 702 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 SHHQ15465 462 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 ZDHHC24Q6UX98 284 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 MRPL43Q8N983 215 aaKnown RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 CCDC89Q8N998 374 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 CDK5RAP1Q96SZ6 601 aaKnown RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 EMILIN2Q9BXX0 1053 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 MFHAS1Q9Y4C4 1052 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 C2orf71A6NGG8 1288 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 IGLV3-27P01718 113 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 RB1P06400 928 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 FAM153BP0C7A2 387 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 SLC10A2Q12908 348 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 PLD1Q13393 1074 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 PAFAH1B3Q15102 231 aaKnown RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 TRIP13Q15645 432 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 FAM153CQ494X1 144 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 GLIS1Q8NBF1 620 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 CCHCR1Q8TD31 782 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 PSMG2Q969U7 264 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 ZNF512Q96ME7 567 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 FUT8Q9BYC5 575 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 TLR9Q9NR96 1032 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 WHRNQ9P202 907 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 FAM153AQ9UHL3 310 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 NR2E3Q9Y5X4 410 aa23.67■■□□□ 1.38
SMARCB1-201ENST00000263121 GBF1Q92538 1859 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 SGK1O00141 431 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 LRIG2O94898 1065 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 SPATA31D3P0C874 917 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 XRCC4Q13426 336 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms