RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 BST2Q10589 180 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 COLEC12Q5KU26 742 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 USP45Q70EL2 814 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 SPATA20Q8TB22 786 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 CD163L1Q9NR16 1453 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 PSMD5Q16401 504 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 RBM15Q96T37 977 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■■■□ 25
SHANK3-201ENST00000262795 MAGI3Q5TCQ9 1506 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 RNASEH2AO75792 299 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 OR56A5P0C7T3 313 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 RBP3P10745 1247 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 CSHL1Q14406 222 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 AMZ1Q400G9 498 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 GALNT4Q8N4A0 578 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 WDR24Q96S15 920 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 ZCCHC2Q9C0B9 1178 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 FMO4P31512 558 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 MARC1Q5VT66 337 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 TTC39BQ5VTQ0 682 aaPredicted RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 CD302Q8IX05 232 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 TRPC4APQ8TEL6 797 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 ZNF473Q8WTR7 871 aaKnown RBP16.25■□□□□ 0.19
SHANK3-201ENST00000262795 CCT7Q99832 543 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 ELOVL6Q9H5J4 265 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 UBAP1Q9NZ09 502 aa16.25■□□□□ 0.19
SHANK3-201ENST00000262795 WSCD1Q658N2 575 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 PARVBQ9HBI1 364 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 VPS51Q9UID3 782 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 GJB1P08034 283 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 NT5C2P49902 561 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 GEMIN4P57678 1058 aaKnown RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 TPD52L3Q96J77 140 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 OSBPL8Q9BZF1 889 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 IQCMA0A1B0GVH7 501 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 KRT8P05787 483 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 RPA1P27694 616 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 GLMNQ92990 594 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 KCNS3Q9BQ31 491 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 AGPAT3Q9NRZ7 376 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 DGKEP52429 567 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 SPIDRQ14159 915 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 CENPLQ8N0S6 344 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 EFCAB3Q8N7B9 438 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 ZBTB10Q96DT7 871 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 MARCH2Q9P0N8 246 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 RPTORQ8N122 1335 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 RNF103O00237 685 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 DYNC1I2Q13409 638 aaKnown RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 PMEPA1Q969W9 287 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 SLC4A5Q9BY07 1137 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 KCND2Q9NZV8 630 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 DNMT3LQ9UJW3 386 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 VPS9D1Q9Y2B5 631 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 CAB39Q9Y376 341 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 PEX10O60683 326 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 UBTFL6P0CB48 400 aaPredicted RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 CTPS1P17812 591 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 CCINQ13939 588 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 AGAP9Q5VTM2 703 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 SUGP1Q8IWZ8 645 aaKnown RBP16.24■□□□□ 0.19
SHANK3-201ENST00000262795 KLK6Q92876 244 aa16.24■□□□□ 0.19
SHANK3-201ENST00000262795 CNTNAP5Q8WYK1 1306 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 H0Y858 1186 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 SERPINB3P29508 390 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 GSSP48637 474 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 VSNL1P62760 191 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 TEDDM1Q5T9Z0 273 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 PHF21BQ96EK2 531 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
SHANK3-201ENST00000262795 CISHQ9NSE2 258 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 TSPAN16Q9UKR8 245 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ST3GAL5Q9UNP4 418 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 BUD23O43709 281 aaKnown RBP16.23■□□□□ 0.19
SHANK3-201ENST00000262795 CUL4AQ13619 759 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 PACS1Q6VY07 963 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 MACC1Q6ZN28 852 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 KIF2BQ8N4N8 673 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ZNF333Q96JL9 665 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 SENP8Q96LD8 212 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 TKTL2Q9H0I9 626 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 NSMCE4AQ9NXX6 385 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 PTPRJQ12913 1337 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 CCDC189A1A4V9 331 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 SLC2A4P14672 509 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ARMC12Q5T9G4 340 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 FFAR2O15552 330 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 GNRH1P01148 92 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ZNF24P17028 368 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
SHANK3-201ENST00000262795 STK4Q13043 487 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 ATAD3BQ5T9A4 648 aa16.23■□□□□ 0.19
SHANK3-201ENST00000262795 PRSS58Q8IYP2 241 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms