RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 GPR158Q5T848 1215 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 DEFB123Q8N688 67 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 HSPH1Q92598 858 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 SNX10Q9Y5X0 201 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 PCK1P35558 622 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 GGCXP38435 758 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 PPP3CCP48454 512 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 KCNQ1P51787 676 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 ZXDBP98169 803 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 RPS6KA1Q15418 735 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 GPR149Q86SP6 731 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 ST13P5Q8NFI4 369 aaPredicted RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 CMASQ8NFW8 434 aaPredicted RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 UBXN4Q92575 508 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 RNF34Q969K3 372 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 PGAP3Q96FM1 320 aaPredicted RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 ZSWIM3Q96MP5 696 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 NAPGQ99747 312 aaPredicted RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 RRN3Q9NYV6 651 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 XPO7Q9UIA9 1087 aaKnown RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 DNMT3LQ9UJW3 386 aa28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 MRPS23Q9Y3D9 190 aaKnown RBP28.55■■■□□ 2.16
SMARCD3-201ENST00000262188 PI4K2BG5E9Z4 385 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 PRPSAP2O60256 369 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 IRF1P10914 325 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 HDCP19113 662 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 CTNNA1P35221 906 aaKnown RBP28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 ZNF211Q13398 564 aaPredicted RBP28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 ACAP1Q15027 740 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 DCAF12L1Q5VU92 463 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 SLITRK6Q9H5Y7 841 aa28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 OLA1Q9NTK5 396 aaKnown RBP28.54■■■□□ 2.16
SMARCD3-201ENST00000262188 CCDC189A1A4V9 331 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 CTAGE9A4FU28 777 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 MOCS2O96007 188 aaPredicted RBP28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 SRGAP2BP0DMP2 458 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 RARAP10276 462 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 MBL2P11226 248 aaPredicted RBP28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 CXCR3P49682 368 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 PEX5P50542 639 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 RHOT1Q8IXI2 618 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 PYROXD2Q8N2H3 581 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 SERPINB11Q96P15 392 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 SNRNP25Q9BV90 132 aaKnown RBP28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 POU2F2P09086 479 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 TBX4P57082 545 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 ZFYVE27Q5T4F4 411 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 FCRL2Q96LA5 508 aaPredicted RBP28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 TKTL2Q9H0I9 626 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 S1PR5Q9H228 398 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 PCDHA3Q9Y5H8 950 aa28.53■■■□□ 2.16
SMARCD3-201ENST00000262188 PAPLNO95428 1278 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 CKMP06732 381 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 DESP17661 470 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 GBP1P32455 592 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 TUBP50607 506 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 ANKS1BQ7Z6G8 1248 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 RAPGEF5Q92565 580 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 ZFRQ96KR1 1074 aaKnown RBP28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 WDCPQ9H6R7 721 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 ADAM21Q9UKJ8 722 aa28.52■■■□□ 2.16
SMARCD3-201ENST00000262188 EFCAB8A8MWE9 144 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 H3BQ06 376 aaPredicted RBP28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 KCNK3O14649 394 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 ZNF185O15231 689 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 CD48P09326 243 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 CTNNA2P26232 953 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 HADHQ16836 314 aaKnown RBP28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 TLR6Q9Y2C9 796 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 CPQQ9Y646 472 aa28.51■■■□□ 2.16
SMARCD3-201ENST00000262188 TRIP4Q15650 581 aaPredicted RBP28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 SND1Q7KZF4 910 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 GET4Q7L5D6 327 aaPredicted RBP28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 PABPC5Q96DU9 382 aaKnown RBP28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 SLC39A13Q96H72 371 aa28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 CCL26Q9Y258 94 aa28.51■■■□□ 2.15
SMARCD3-201ENST00000262188 OLFM2O95897 454 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 ZNF276Q8N554 614 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 COG1Q8WTW3 980 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 RNF25Q96BH1 459 aaPredicted RBP28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 KLF16Q9BXK1 252 aaPredicted RBP28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 ADAM7Q9H2U9 754 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 FZD10Q9ULW2 581 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 PSTPIP1O43586 416 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 F9P00740 461 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 KRT1P04264 644 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 PYGMP11217 842 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 FOSL2P15408 326 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 KLHDC10Q6PID8 442 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 ADAMTS19Q8TE59 1207 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 MSLNLQ96KJ4 702 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 CDK5RAP1Q96SZ6 601 aaKnown RBP28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 SMARCAL1Q9NZC9 954 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 AP4E1Q9UPM8 1137 aa28.5■■■□□ 2.15
SMARCD3-201ENST00000262188 A0A087WUV0 522 aaPredicted RBP28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 TRAV19A0A0A6YYK7 116 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 HOXB8P17481 243 aaPredicted RBP28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 FSHRP23945 695 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 ADRA1BP35368 520 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms