RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
TMEM260-201ENST00000261556 C2orf49Q9BVC5 232 aaPredicted RBP13.34□□□□□ -0.27
TMEM260-201ENST00000261556 CLK4Q9HAZ1 481 aaKnown RBP13.34□□□□□ -0.27
TMEM260-201ENST00000261556 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 DNAJC16Q9Y2G8 782 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 AGLP35573 1532 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 HSD17B4P51659 736 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 UBE3AQ05086 875 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
TMEM260-201ENST00000261556 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 FAM182AQ5T1J6 154 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 CGB2Q6NT52 195 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 CAMSAP1Q5T5Y3 1602 aa13.34□□□□□ -0.27
TMEM260-201ENST00000261556 TTC34A8MYJ7 566 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 GGPS1O95749 300 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 EFTUD2Q15029 972 aaKnown RBP eCLIP13.33□□□□□ -0.27
TMEM260-201ENST00000261556 ARMCX2Q7L311 632 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 MICU2Q8IYU8 434 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 LILRB4Q8NHJ6 448 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 PAFAH2Q99487 392 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 MMP19Q99542 508 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 OLFM1Q99784 485 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 CHST7Q9NS84 486 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 TOR4AQ9NXH8 423 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 WHRNQ9P202 907 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.27
TMEM260-201ENST00000261556 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 MED7O43513 233 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 HNRNPH3P31942 346 aaKnown RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 CCT3P49368 545 aaKnown RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 XIAPP98170 497 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 CNDP1Q96KN2 507 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 MECRQ9BV79 373 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 CDC14AQ9UNH5 594 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TRIM49D1C9J1S8 452 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 H0Y626 953 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 CLOCKO15516 846 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 RGS20O76081 388 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 ALOX5P09917 674 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TXNP10599 105 aaKnown RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 ARL4AP40617 200 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 NECAB2Q7Z6G3 386 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 AZIN2Q96A70 460 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TCRBV7S2A1N4TA0A589 114 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TMEM253P0C7T8 217 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 DEFA1P59665 94 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 DEFA3P59666 94 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 CDO1Q16878 200 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 BNC2Q6ZN30 1099 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 MMAAQ8IVH4 418 aaKnown RBP13.33□□□□□ -0.28
TMEM260-201ENST00000261556 SLC30A5Q8TAD4 765 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 LPAR1Q92633 364 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 MARK4Q96L34 752 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 ZNF304Q9HCX3 659 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 PCSK1NQ9UHG2 260 aa13.33□□□□□ -0.28
TMEM260-201ENST00000261556 TRIM49P0CI25 452 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 TRIM49CP0CI26 452 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 NFIAQ12857 509 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 GK3PQ14409 553 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 NATD1Q8N6N6 113 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 C12orf50Q8NA57 414 aaPredicted RBP13.32□□□□□ -0.28
TMEM260-201ENST00000261556 KIAA0895Q8NCT3 520 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 CGREF1Q99674 301 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 NEK6Q9HC98 313 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 FNDC3AQ9Y2H6 1198 aaKnown RBP13.32□□□□□ -0.28
TMEM260-201ENST00000261556 AQP9O43315 295 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 KRT1P04264 644 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 ZNF846Q147U1 533 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 HAUS6Q7Z4H7 955 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 IFNEQ86WN2 208 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 ALKBH8Q96BT7 664 aaKnown RBP13.32□□□□□ -0.28
TMEM260-201ENST00000261556 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 ZNF221Q9UK13 617 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 MAGED2Q9UNF1 606 aaPredicted RBP13.32□□□□□ -0.28
TMEM260-201ENST00000261556 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
TMEM260-201ENST00000261556 NR3C2P08235 984 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms