RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PORCNQ9H237 461 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-201ENST00000261366 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
LMNB1-201ENST00000261366 H0YCG3 227 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 H3BNX3 289 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 GSRP00390 522 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TSHRP16473 764 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 FSTL1Q12841 308 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TBCCQ15814 346 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 SNRNP48Q6IEG0 339 aaKnown RBP16.39■□□□□ 0.21
LMNB1-201ENST00000261366 PTAR1Q7Z6K3 402 aaPredicted RBP16.39■□□□□ 0.21
LMNB1-201ENST00000261366 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 HEXIM2Q96MH2 286 aaKnown RBP16.39■□□□□ 0.21
LMNB1-201ENST00000261366 RNF157Q96PX1 679 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 SDCBP2Q9H190 292 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 ASNSD1Q9NWL6 643 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 HSFX1Q9UBD0 423 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 FZD1Q9UP38 647 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 MICAL2O94851 1124 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 AMHP03971 560 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TFAP2AP05549 437 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 GALK1P51570 392 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 PGGT1BP53609 377 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 GBE1Q04446 702 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 PDK1Q15118 436 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 CYTH1Q15438 398 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TRIM74Q86UV6 250 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TRIM73Q86UV7 250 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 PQLC3Q8N755 202 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
LMNB1-201ENST00000261366 ITFG2Q969R8 447 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 MARK4Q96L34 752 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 MIS12Q9H081 205 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF302Q9NR11 478 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 DNAAF2Q9NVR5 837 aaKnown RBP16.39■□□□□ 0.21
LMNB1-201ENST00000261366 TMEM216Q9P0N5 145 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF180Q9UJW8 692 aa16.39■□□□□ 0.21
LMNB1-201ENST00000261366 MAGEB3O15480 346 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PEX10O60683 326 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PLA2G6O60733 806 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 EGFRP00533 1210 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PCSK6P29122 969 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 COG7P83436 770 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 TFDP2Q14188 446 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PCLAFQ15004 111 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ACTRT2Q8TDY3 377 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 SIGLEC10Q96LC7 697 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 EBNA1BP2Q99848 306 aaKnown RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 DEFB129Q9H1M3 183 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 WDR55Q9H6Y2 383 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 LIN28AQ9H9Z2 209 aaKnown RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ZDHHC7Q9NXF8 308 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 APOL1O14791 398 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ATG7O95352 703 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 COX4I1P13073 169 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 NAMPTP43490 491 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ATXN1P54253 815 aaKnown RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 OLIG2Q13516 323 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 TAZQ16635 292 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 SLC9B1Q4ZJI4 515 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF781Q8N8C0 355 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 FAM156AQ8NDB6 213 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PCDH19Q8TAB3 1148 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 DGCR14Q96DF8 476 aaKnown RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 CMTM5Q96DZ9 223 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 LENG8Q96PV6 779 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 SORT1Q99523 831 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 FRMD8P1Q9BZ68 369 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 TBC1D30Q9Y2I9 924 aa16.38■□□□□ 0.21
LMNB1-201ENST00000261366 STX16-NPEPL1H3BU86 382 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 MYLK3Q32MK0 819 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 PGM2L1Q6PCE3 622 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 EEPD1Q7L9B9 569 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 ZFP28Q8NHY6 868 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 LRGUKQ96M69 825 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 MRPL1Q9BYD6 325 aaKnown RBP16.37■□□□□ 0.21
LMNB1-201ENST00000261366 COG4Q9H9E3 785 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 XPNPEP3Q9NQH7 507 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 MFHAS1Q9Y4C4 1052 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 AP4B1Q9Y6B7 739 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
LMNB1-201ENST00000261366 PLIN3O60664 434 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 CRTAMO95727 393 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 OATP04181 439 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 GPD1P21695 349 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 CCR10P46092 362 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 GRM2Q14416 872 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 MAP3K21Q5TCX8 1036 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms