RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 POU6F1Q14863 301 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 BNC2Q6ZN30 1099 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 P3H2Q8IVL5 708 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 SLC44A2Q8IWA5 706 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 AHCYL2Q96HN2 611 aaKnown RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 PNMA5Q96PV4 448 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 CEP41Q9BYV8 373 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 SENP6Q9GZR1 1112 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 ZDHHC6Q9H6R6 413 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 SLCO1B7G3V0H7 640 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 XPO1O14980 1071 aaKnown RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 TPBGLP0DKB5 382 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 PRLRP16471 622 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 MGAT1P26572 445 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 SLC1A6P48664 564 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 TBL3Q12788 808 aaKnown RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 MPP3Q13368 585 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 IKBKEQ14164 716 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF614Q8N883 585 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 REPS1Q96D71 796 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 PCDH9Q9HC56 1237 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 CAB39Q9Y376 341 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-201ENST00000254630 CAPN6Q9Y6Q1 641 aa8.93□□□□□ -0.98
PTCD3-201ENST00000254630 LOC100653049A0A140TA62 436 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SPTLC1O15269 473 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 KRT34O76011 436 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 IFNA14P01570 189 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 FGFR1P11362 822 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 HPGDP15428 266 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 RUNX1T1Q06455 604 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 DOK6Q6PKX4 331 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CYP20A1Q6UW02 462 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 B3GALNT2Q8NCR0 500 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TMEM134Q9H6X4 195 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ZC4H2Q9NQZ6 224 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TAGLN3Q9UI15 199 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF112Q9UJU3 913 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 PARP4Q9UKK3 1724 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 hCG_2014768A0A024R1R8 64 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CABYRO75952 493 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CYP3A4P08684 503 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 RARRES1P49788 294 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 MGAT5Q09328 741 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ILF2Q12905 390 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CAPRIN2Q6IMN6 1127 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SLC26A11Q86WA9 606 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SLC2A14Q8TDB8 520 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 DNAJC9Q8WXX5 260 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 THAP11Q96EK4 314 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 IDI2Q9BXS1 227 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 KRT84Q9NSB2 600 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TRHDEQ9UKU6 1024 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TMCC3Q9ULS5 477 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 KLHL20Q9Y2M5 609 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SNTNA6NMZ2 147 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SLC2A4P14672 509 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CRABP2P29373 138 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 PCYT1AP49585 367 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 MAD2L1Q13257 205 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 RD3Q7Z3Z2 195 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ASB7Q9H672 318 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 MIEF1Q9NQG6 463 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ABCC13Q9NSE7 274 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 IMPAD1Q9NX62 359 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TRAV19A0A0A6YYK7 116 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ANKRD63C9JTQ0 380 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ACKR2O00590 384 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 PTPRAP18433 802 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 MLH1P40692 756 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CD151P48509 253 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ALDH9A1P49189 494 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CNTN2Q02246 1040 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CDH17Q12864 832 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 NTRK3Q16288 839 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CBWD3Q5JTY5 395 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CBWD5Q5RIA9 395 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 DSG4Q86SJ6 1040 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 BRSK2Q8IWQ3 736 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 HTR3CQ8WXA8 447 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SEPT3Q9UH03 358 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SLC24A2Q9UI40 661 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 KATNA1O75449 491 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF682O95780 498 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 RPN2P04844 631 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 CPA3P15088 417 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TPH1P17752 444 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TNNI3P19429 210 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 BDNFP23560 247 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 PAPD7Q5XG87 772 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 TTC33Q6PID6 262 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 LRRC8DQ7L1W4 858 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 LRRC6Q86X45 466 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ZFPM1Q8IX07 1006 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 UNKQ9C0B0 810 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms