RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
SDC1-201ENST00000254351 TNFAIP8O95379 198 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 NPR1P16066 1061 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 EPHA3P29320 983 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ANGEL2Q5VTE6 544 aaKnown RBP14.8□□□□□ -0.04
SDC1-201ENST00000254351 FAM219BQ5XKK7 198 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 KBTBD6Q86V97 674 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ZNF781Q8N8C0 355 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 GIPC3Q8TF64 312 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 CMTM5Q96DZ9 223 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 Q9H521 79 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 COG4Q9H9E3 785 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 C17orf75Q9HAS0 396 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 PLAC1Q9HBJ0 212 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 CISHQ9NSE2 258 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 DDX56Q9NY93 547 aaKnown RBP14.8□□□□□ -0.04
SDC1-201ENST00000254351 CYTH4Q9UIA0 394 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ARHGAP26Q9UNA1 814 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 SSX2IPQ9Y2D8 614 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 PSAT1Q9Y617 370 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 KLF11O14901 512 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 KLHL2O95198 593 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ZBED1O96006 694 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 CALB1P05937 261 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 SLC25A11Q02978 314 aaKnown RBP14.8□□□□□ -0.04
SDC1-201ENST00000254351 WASHC5Q12768 1159 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 IL31Q6EBC2 164 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 B3GNT9Q6UX72 402 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 CAND1Q86VP6 1230 aaKnown RBP14.8□□□□□ -0.04
SDC1-201ENST00000254351 ARL10Q8N8L6 244 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ACTRT2Q8TDY3 377 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 DMTF1Q9Y222 760 aa14.8□□□□□ -0.04
SDC1-201ENST00000254351 ARHGAP10A1A4S6 786 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 WDR27A2RRH5 827 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 TTC36A6NLP5 189 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 STRNO43815 780 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 SNNO75324 88 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 APOEP02649 317 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 CDH2P19022 906 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 VARSP26640 1264 aaKnown RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 TCF7P36402 384 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 OLIG2Q13516 323 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 ATP1A4Q13733 1029 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 UBA3Q8TBC4 463 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 COA1Q9GZY4 146 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 C1orf21Q9H246 121 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 POPDC2Q9HBU9 364 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 RRN3Q9NYV6 651 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 PAIP2BQ9ULR5 123 aaKnown RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 PPME1Q9Y570 386 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 FGF3P11487 239 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 ABCD1P33897 745 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 FSTL1Q12841 308 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 CCDC28BQ9BUN5 200 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 TMEM216Q9P0N5 145 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 USP18Q9UMW8 372 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 HSPA4LO95757 839 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 HMGCRP04035 888 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 SLC10A2Q12908 348 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 MBLAC2Q68D91 279 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 SLC9A4Q6AI14 798 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 CYP2R1Q6VVX0 501 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 TRIM72Q6ZMU5 477 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 DIS3LQ8TF46 1054 aaKnown RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 RCN3Q96D15 328 aa14.79□□□□□ -0.04
SDC1-201ENST00000254351 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 SUDS3Q9H7L9 328 aaPredicted RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 NGRNQ9NPE2 291 aaKnown RBP14.79□□□□□ -0.04
SDC1-201ENST00000254351 COL11A2P13942 1736 aaPredicted RBP14.78□□□□□ -0.04
SDC1-201ENST00000254351 THRAP10827 490 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 ARSAP15289 507 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 OGFRL1Q5TC84 451 aaPredicted RBP14.78□□□□□ -0.04
SDC1-201ENST00000254351 KRT80Q6KB66 452 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 PGM2L1Q6PCE3 622 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 FASTKD5Q7L8L6 764 aaKnown RBP14.78□□□□□ -0.04
SDC1-201ENST00000254351 TSPAN14Q8NG11 270 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 PEBP4Q96S96 227 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 PAIP1Q9H074 479 aaKnown RBP14.78□□□□□ -0.04
SDC1-201ENST00000254351 DHX35Q9H5Z1 703 aaKnown RBP14.78□□□□□ -0.04
SDC1-201ENST00000254351 ADA2Q9NZK5 511 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 EBF1Q9UH73 591 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 SH3GLB1Q9Y371 365 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 CENPFP49454 3210 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 CROCCQ5TZA2 2017 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 APOC4-APOC2K7ER74 178 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 EXTL3O43909 919 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 METTL18O95568 372 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 APOC2P02655 101 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 OATP04181 439 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 KRT7P08729 469 aa14.78□□□□□ -0.04
SDC1-201ENST00000254351 SLC5A3P53794 718 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms