RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CCDC188H7C350 402 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ERCC2P18074 760 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 CHRNA3P32297 505 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 CDKN2BP42772 138 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 TUBP50607 506 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PALM2Q8IXS6 379 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ARL14EPQ8N8R7 260 aaPredicted RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ACBD6Q9BR61 282 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 UBN1Q9NPG3 1134 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 OSER1Q9NX31 292 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 MARCH2Q9P0N8 246 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 A0A1W2PRU2 124 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 HIDE1A8MVS5 230 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 CCL22O00626 93 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 WARSP23381 471 aaKnown RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 SSTR1P30872 391 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 SEPT6Q14141 434 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 STILQ15468 1287 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ARL13BQ3SXY8 428 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 LRRC73Q5JTD7 316 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ANKRD22Q5VYY1 191 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 TMEM86AQ8N2M4 240 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 MMGT1Q8N4V1 131 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 EXD1Q8NHP7 514 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 MCRS1Q96EZ8 462 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 FCRL2Q96LA5 508 aaPredicted RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 RBM15Q96T37 977 aaKnown RBP eCLIP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PRDM12Q9H4Q4 367 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 NDFIP2Q9NV92 336 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PRR23AA6NEV1 266 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 RNF40O75150 1001 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 MBL2P11226 248 aaPredicted RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PRMT2P55345 433 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 TMPRSS15P98073 1019 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 DPYSL3Q14195 570 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 PCBP1Q15365 356 aaKnown RBP eCLIP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ANKRD20A8PQ5CZ79 823 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 ARHGAP36Q6ZRI8 547 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 EPS8L3Q8TE67 593 aaKnown RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 SLC4A5Q9BY07 1137 aa12.05□□□□□ -0.48
LIN28A-201ENST00000254231 MRPL17Q9NRX2 175 aaKnown RBP12.05□□□□□ -0.48
LIN28A-201ENST00000254231 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 SCN5AQ14524 2016 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 C2orf78A6NCI8 922 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 LINGO4Q6UY18 593 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
LIN28A-201ENST00000254231 MDM1Q8TC05 714 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 ABCG8Q9H221 673 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 GOLGA6CA6NDK9 693 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 PAGE1O75459 146 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 FGF18O76093 207 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 GOLGA6DP0CG33 693 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 KRT15P19012 456 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 GABRR2P28476 465 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 HOXC8P31273 242 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 ACADSBP45954 432 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 IRAK1P51617 712 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 RPS24P62847 133 aaKnown RBP12.04□□□□□ -0.48
LIN28A-201ENST00000254231 NFE2Q16621 373 aaPredicted RBP12.04□□□□□ -0.48
LIN28A-201ENST00000254231 RASIP1Q5U651 963 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 ACBD3Q9H3P7 528 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 ACSS2Q9NR19 701 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 GOLGA6AQ9NYA3 693 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 CNTN6Q9UQ52 1028 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 NEU2Q9Y3R4 380 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 MGAMO43451 1857 aa12.04□□□□□ -0.48
LIN28A-201ENST00000254231 ARID2Q68CP9 1835 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 MTMR11A4FU01 709 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 MFSD11O43934 449 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 LPXNO60711 386 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 LRIG2O94898 1065 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 SEC24AO95486 1093 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 PRLRP16471 622 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 NOS2P35228 1153 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 IRS1P35568 1242 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
LIN28A-201ENST00000254231 BOLA3Q53S33 107 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 C14orf80Q86SX3 495 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 ATP11CQ8NB49 1132 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 CD101Q93033 1021 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 IGSF21Q96ID5 467 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 ZFYVE19Q96K21 471 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TLR9Q9NR96 1032 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TMEM59LQ9UK28 342 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 NENFQ9UMX5 172 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 AGRPO00253 132 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TEX28O15482 410 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 PSTPIP1O43586 416 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 CNTN5O94779 1100 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms