RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 C22orf31O95567 290 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 SLC18A2Q05940 514 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 LAMC2Q13753 1193 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 DDX50Q9BQ39 737 aaKnown RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 CPSF2Q9P2I0 782 aaKnown RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 LNPEPQ9UIQ6 1025 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 PIN4Q9Y237 131 aaKnown RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 PPME1Q9Y570 386 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 HUS1O60921 280 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 TBX10O75333 385 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 ACAT1P24752 427 aaKnown RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 HDAC4P56524 1084 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 CTC1Q2NKJ3 1217 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 HACE1Q8IYU2 909 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 DOCK5Q9H7D0 1870 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 OPHN1O60890 802 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 CCDC185Q8N715 623 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 TEKT4Q8WW24 435 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 ZNF669Q96BR6 464 aaPredicted RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 DHRS4Q9BTZ2 278 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 GBA2Q9HCG7 927 aaPredicted RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 THAP1Q9NVV9 213 aa19.01■□□□□ 0.63
LRP3-201ENST00000253193 MRPL42Q9Y6G3 142 aaKnown RBP19.01■□□□□ 0.63
LRP3-201ENST00000253193 M0QYT0 321 aa19■□□□□ 0.63
LRP3-201ENST00000253193 RNF103O00237 685 aa19■□□□□ 0.63
LRP3-201ENST00000253193 NEMP1O14524 444 aa19■□□□□ 0.63
LRP3-201ENST00000253193 TGDSO95455 350 aa19■□□□□ 0.63
LRP3-201ENST00000253193 PROZP22891 400 aa19■□□□□ 0.63
LRP3-201ENST00000253193 SLC1A6P48664 564 aa19■□□□□ 0.63
LRP3-201ENST00000253193 CUL3Q13618 768 aa19■□□□□ 0.63
LRP3-201ENST00000253193 ITGA9Q13797 1035 aa19■□□□□ 0.63
LRP3-201ENST00000253193 PPM1JQ5JR12 505 aa19■□□□□ 0.63
LRP3-201ENST00000253193 RASIP1Q5U651 963 aa19■□□□□ 0.63
LRP3-201ENST00000253193 DEFB106AQ8N104 65 aa19■□□□□ 0.63
LRP3-201ENST00000253193 CFLARO15519 480 aa19■□□□□ 0.63
LRP3-201ENST00000253193 PDE5AO76074 875 aa19■□□□□ 0.63
LRP3-201ENST00000253193 ETV4P43268 484 aa19■□□□□ 0.63
LRP3-201ENST00000253193 DNAL1Q4LDG9 190 aa19■□□□□ 0.63
LRP3-201ENST00000253193 MZB1Q8WU39 189 aa19■□□□□ 0.63
LRP3-201ENST00000253193 ZNF670Q9BS34 389 aa19■□□□□ 0.63
LRP3-201ENST00000253193 GOLGA8TH3BQL2 631 aa19■□□□□ 0.63
LRP3-201ENST00000253193 BPGMP07738 259 aa19■□□□□ 0.63
LRP3-201ENST00000253193 C6orf222P0C671 652 aaPredicted RBP19■□□□□ 0.63
LRP3-201ENST00000253193 EDNRBP24530 442 aa19■□□□□ 0.63
LRP3-201ENST00000253193 CALRP27797 417 aaKnown RBP19■□□□□ 0.63
LRP3-201ENST00000253193 TNS4Q8IZW8 715 aa19■□□□□ 0.63
LRP3-201ENST00000253193 CSPG4P5Q96PW8 444 aa19■□□□□ 0.63
LRP3-201ENST00000253193 KCNK13Q9HB14 408 aa19■□□□□ 0.63
LRP3-201ENST00000253193 CYLDQ9NQC7 956 aa19■□□□□ 0.63
LRP3-201ENST00000253193 ACSS2Q9NR19 701 aa19■□□□□ 0.63
LRP3-201ENST00000253193 UBP1Q9NZI7 540 aa19■□□□□ 0.63
LRP3-201ENST00000253193 BCLAF3A2AJT9 711 aaKnown RBP18.99■□□□□ 0.63
LRP3-201ENST00000253193 ZMPSTE24O75844 475 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 ITGBL1O95965 494 aaPredicted RBP18.99■□□□□ 0.63
LRP3-201ENST00000253193 PSMB4P28070 264 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 GMPRP36959 345 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 RIPOR1Q6ZS17 1223 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 ERO1BQ86YB8 467 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 TREML1Q86YW5 311 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 APPL2Q8NEU8 664 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 FBXO27Q8NI29 283 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 TMPRSS4Q9NRS4 437 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 FIS1Q9Y3D6 152 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 FZD9O00144 591 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 MX2P20592 715 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 ADIGQ0VDE8 80 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 IZUMO2Q6UXV1 221 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 SKA1Q96BD8 255 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 RBBP6Q7Z6E9 1792 aaKnown RBP18.99■□□□□ 0.63
LRP3-201ENST00000253193 IGKV6-21A0A0C4DH24 114 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 RFPL1O75677 317 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 USP1O94782 785 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 KYAT1Q16773 422 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 OLFML1Q6UWY5 402 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 ENDOVQ8N8Q3 282 aaKnown RBP18.99■□□□□ 0.63
LRP3-201ENST00000253193 LRRC39Q96DD0 335 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 PGLYRP2Q96PD5 576 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 GOLGA2P5Q9HBQ8 144 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 XPNPEP3Q9NQH7 507 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 BFARQ9NZS9 450 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 RBPJLQ9UBG7 517 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 PCDHA11Q9Y5I1 949 aa18.99■□□□□ 0.63
LRP3-201ENST00000253193 MYO18AQ92614 2054 aaKnown RBP18.98■□□□□ 0.63
LRP3-201ENST00000253193 POLBP06746 335 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 SP100P23497 879 aaPredicted RBP18.98■□□□□ 0.63
LRP3-201ENST00000253193 IL4RP24394 825 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 GABRB2P47870 512 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 ATXN3P54252 364 aaPredicted RBP18.98■□□□□ 0.63
LRP3-201ENST00000253193 CMC1Q7Z7K0 106 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 SLC7A14Q8TBB6 771 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 PYDC1Q8WXC3 89 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 ZNF333Q96JL9 665 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 MAN1C1Q9NR34 630 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 PACSIN3Q9UKS6 424 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 C2CD2Q9Y426 696 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 HBS1LQ9Y450 684 aaKnown RBP18.98■□□□□ 0.63
LRP3-201ENST00000253193 E9PBE3 544 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 KLHL41O60662 606 aa18.98■□□□□ 0.63
LRP3-201ENST00000253193 RARBP10826 455 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms