RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 MRE11P49959 708 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 FANCCQ00597 558 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 DMC1Q14565 340 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 XYLT1Q86Y38 959 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 CAMKK1Q8N5S9 505 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 DDI1Q8WTU0 396 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 CPA5Q8WXQ8 436 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 BAP1Q92560 729 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 DDX50Q9BQ39 737 aaKnown RBP26.08■■□□□ 1.77
LSM7-201ENST00000252622 SLC2A11Q9BYW1 496 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 FAM204AQ9H8W3 233 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 MMP17Q9ULZ9 603 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 STARD13Q9Y3M8 1113 aa26.08■■□□□ 1.77
LSM7-201ENST00000252622 PIEZO1Q92508 2521 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 ANTXRLA6NF34 631 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 APOEP02649 317 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 CCDC172P0C7W6 258 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 FERP16591 822 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 NOS2P35228 1153 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 PITX1P78337 314 aaPredicted RBP26.07■■□□□ 1.76
LSM7-201ENST00000252622 FAM133BQ5BKY9 247 aaKnown RBP26.07■■□□□ 1.76
LSM7-201ENST00000252622 LONP2Q86WA8 852 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 RRN3Q9NYV6 651 aa26.07■■□□□ 1.76
LSM7-201ENST00000252622 MYO15AQ9UKN7 3530 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 CCDC163A0A0D9SF12 145 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 HOXD9P28356 352 aaPredicted RBP26.06■■□□□ 1.76
LSM7-201ENST00000252622 GBP1P32455 592 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 TIE1P35590 1138 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 ARID5AQ03989 594 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 DMWDQ09019 674 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 NFKBIBQ15653 356 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 RNF43Q68DV7 783 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 TRMT11Q7Z4G4 463 aaKnown RBP26.06■■□□□ 1.76
LSM7-201ENST00000252622 ALLCQ8N6M5 410 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 IL17RCQ8NAC3 791 aa26.06■■□□□ 1.76
LSM7-201ENST00000252622 TMA16Q96EY4 203 aaKnown RBP26.06■■□□□ 1.76
LSM7-201ENST00000252622 POLR3BQ9NW08 1133 aaPredicted RBP26.06■■□□□ 1.76
LSM7-201ENST00000252622 PRR23AA6NEV1 266 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 TSPAN3O60637 253 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 SLC2A3P11169 496 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 UNGP13051 313 aaPredicted RBP26.05■■□□□ 1.76
LSM7-201ENST00000252622 MMP8P22894 467 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 SLC6A4P31645 630 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 MATKP42679 507 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 FNTBP49356 437 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 ZC3H12AQ5D1E8 599 aaKnown RBP26.05■■□□□ 1.76
LSM7-201ENST00000252622 MPP7Q5T2T1 576 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 FAM102AQ5T9C2 384 aaPredicted RBP26.05■■□□□ 1.76
LSM7-201ENST00000252622 EMC10Q5UCC4 262 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 PIK3R6Q5UE93 754 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 NADSYN1Q6IA69 706 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 ALYREFQ86V81 257 aaKnown RBP26.05■■□□□ 1.76
LSM7-201ENST00000252622 WDR5BQ86VZ2 330 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 TXNDC5Q8NBS9 432 aaKnown RBP26.05■■□□□ 1.76
LSM7-201ENST00000252622 PCDHB18PQ96TA0 734 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 TTYH3Q9C0H2 523 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.05■■□□□ 1.76
LSM7-201ENST00000252622 DDIT4Q9NX09 232 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 ATG2BQ96BY7 2078 aa26.05■■□□□ 1.76
LSM7-201ENST00000252622 PRRT4C9JH25 899 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 KLF8O95600 359 aaPredicted RBP26.04■■□□□ 1.76
LSM7-201ENST00000252622 CENPCQ03188 943 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 FIGNQ5HY92 759 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 EOGTQ5NDL2 527 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 MMS22LQ6ZRQ5 1243 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 CCDC33Q8N5R6 958 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 ZNF513Q8N8E2 541 aaPredicted RBP26.04■■□□□ 1.76
LSM7-201ENST00000252622 BTN2A3PQ96KV6 586 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 HHIPQ96QV1 700 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 AGPAT1Q99943 283 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 EDEM3Q9BZQ6 932 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 EPC1Q9H2F5 836 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.04■■□□□ 1.76
LSM7-201ENST00000252622 HCN2Q9UL51 889 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 CLEC4EQ9ULY5 219 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 STAP1Q9ULZ2 295 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 DMDP11532 3685 aa26.04■■□□□ 1.76
LSM7-201ENST00000252622 GOLGA6L7A0A1B0GV03 622 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 GFRA3O60609 400 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 APBB3O95704 486 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 MOCS2O96007 188 aaPredicted RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 LMNAP02545 664 aaKnown RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 HOXC13P31276 330 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 CCR1P32246 355 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 CNR2P34972 360 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 UBASH3AP57075 661 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 CRY1Q16526 586 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 CLEC16AQ2KHT3 1053 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 C2CD6Q53TS8 623 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 OTUD1Q5VV17 481 aaPredicted RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 HEATR6Q6AI08 1181 aaKnown RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 RFWD3Q6PCD5 774 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 ARCQ7LC44 396 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 ASCL5Q7RTU5 278 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 ANKS1BQ7Z6G8 1248 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 HJURPQ8NCD3 748 aaPredicted RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 NT5C3BQ969T7 300 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 PRICKLE1Q96MT3 831 aaPredicted RBP26.03■■□□□ 1.76
LSM7-201ENST00000252622 NPY6RQ99463 290 aa26.03■■□□□ 1.76
LSM7-201ENST00000252622 TMEM51Q9NW97 253 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms