RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 C16orf86Q6ZW13 317 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TMPRSS9Q7Z410 1059 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 MICU2Q8IYU8 434 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF566Q969W8 418 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TRIT1Q9H3H1 467 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 STN1Q9H668 368 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 CNTNAP5Q8WYK1 1306 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 A0A1W2PPW3 197 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 A8MXQ7 604 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 POLR1CO15160 346 aaPredicted RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 KPNA6O60684 536 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 RARBP10826 455 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 DHDDSQ86SQ9 333 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TTLQ8NG68 377 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHA12Q9UN75 941 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 VWA5AO00534 786 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 TNNI1P19237 187 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 CTNNA2P26232 953 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PIK3CBP42338 1070 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 NLRP11P59045 1033 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 SQLEQ14534 574 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 MAPRE1Q15691 268 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 RNF43Q68DV7 783 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PRR5LQ6MZQ0 368 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 GIMAP8Q8ND71 665 aaPredicted RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 AP4B1Q9Y6B7 739 aa13.73□□□□□ -0.21
COLGALT1-201ENST00000252599 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 FAM172BPA6NC97 362 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 CCDC182A6NF36 153 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 H0YIN7 160 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 RTCAO00442 366 aaKnown RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 CFLARO15519 480 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 FKBP9O95302 570 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 UQCRC1P31930 480 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 NPEPPSP55786 919 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 STXBP2Q15833 593 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ANKS1AQ92625 1134 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 VPS33AQ96AX1 596 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 C12orf10Q9HB07 376 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PRIM2P49643 509 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF45Q02386 682 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF704Q6ZNC4 412 aaPredicted RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ARID3BQ8IVW6 561 aaPredicted RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PRICKLE1Q96MT3 831 aaPredicted RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 GHITMQ9H3K2 345 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 GNPTGQ9UJJ9 305 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 LGALS16A8MUM7 142 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PLSCR1O15162 318 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 CLIC2O15247 247 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 CPNE3O75131 537 aaKnown RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ASS1P00966 412 aaKnown RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 RAG1P15918 1043 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 GRIA2P42262 883 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PRKCQQ04759 706 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 DLG2Q15700 870 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 UNC13DQ70J99 1090 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 ASRGL1Q7L266 308 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PSMA8Q8TAA3 256 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 SLC24A2Q9UI40 661 aa13.72□□□□□ -0.21
COLGALT1-201ENST00000252599 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 FKBP6O75344 327 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 GH1P01241 217 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms