RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CRLF3Q8IUI8 442 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 PIWIL1Q96J94 861 aaKnown RBP19.55■□□□□ 0.72
SNX4-201ENST00000251775 RILPQ96NA2 401 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 MIS12Q9H081 205 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 TMCO1Q9UM00 188 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 ASB14A6NK59 587 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 APOC4-APOC2K7ER74 178 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 SNNO75324 88 aaPredicted RBP19.55■□□□□ 0.72
SNX4-201ENST00000251775 AVILO75366 819 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 APOC2P02655 101 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 HMGCRP04035 888 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 NDST1P52848 882 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 EIF3EP60228 445 aaKnown RBP19.55■□□□□ 0.72
SNX4-201ENST00000251775 SLC25A3Q00325 362 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 DLG1Q12959 904 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 TMEM132DQ14C87 1099 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 SYCP2LQ5T4T6 812 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 MAMDC4Q6UXC1 1216 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 CYP4V2Q6ZWL3 525 aaPredicted RBP19.55■□□□□ 0.72
SNX4-201ENST00000251775 SATL1Q86VE3 508 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 PPM1NQ8N819 430 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 ETNK2Q9NVF9 386 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 TTLL3Q9Y4R7 772 aa19.55■□□□□ 0.72
SNX4-201ENST00000251775 SDR42E2A6NKP2 422 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 RFPL1O75677 317 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 OR6B1O95007 311 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 SNRPAP09012 282 aaKnown RBP19.54■□□□□ 0.72
SNX4-201ENST00000251775 ZNF286BP0CG31 522 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 VCLP18206 1134 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 AOC1P19801 751 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 NPNTQ6UXI9 565 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 NUDCD3Q8IVD9 361 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 SLC13A1Q9BZW2 595 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 KLHL4Q9C0H6 718 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 KAT6AQ92794 2004 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 ARHGAP42A6NI28 874 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 CXorf49A8MYA2 514 aaPredicted RBP19.54■□□□□ 0.72
SNX4-201ENST00000251775 CYP2C8P10632 490 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 RBP3P10745 1247 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 PEX2P28328 305 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 ZNF143P52747 638 aaPredicted RBP19.54■□□□□ 0.72
SNX4-201ENST00000251775 LAMC2Q13753 1193 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 CCNIQ14094 377 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 ACAP1Q15027 740 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 FASTKD5Q7L8L6 764 aaKnown RBP19.54■□□□□ 0.72
SNX4-201ENST00000251775 CTAGE3PQ8IX95 158 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 CFAP36Q96G28 342 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 PNPLA8Q9NP80 782 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 ASNSD1Q9NWL6 643 aa19.54■□□□□ 0.72
SNX4-201ENST00000251775 BARX2Q9UMQ3 279 aaPredicted RBP19.54■□□□□ 0.72
SNX4-201ENST00000251775 SPAG6O75602 509 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 ATP5BP06576 529 aaKnown RBP19.53■□□□□ 0.72
SNX4-201ENST00000251775 P4HA1P13674 534 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 INHBCP55103 352 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 INCA1Q0VD86 236 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 C15orf59Q2T9L4 293 aaPredicted RBP19.53■□□□□ 0.72
SNX4-201ENST00000251775 FAM182AQ5T1J6 154 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 AFG1LQ8WV93 481 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 RXFP2Q8WXD0 754 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 HIC2Q96JB3 615 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 DPP3Q9NY33 737 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 SCN1AP35498 2009 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 CCNT2O60583 730 aaKnown RBP19.53■□□□□ 0.72
SNX4-201ENST00000251775 KRT37O76014 449 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 SORBS2O94875 1100 aaKnown RBP19.53■□□□□ 0.72
SNX4-201ENST00000251775 ENDOD1O94919 500 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 PFKMP08237 780 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 GPD1P21695 349 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 KCNJ11Q14654 390 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 RALGPS1Q5JS13 557 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 FAM183BPQ6ZVS7 135 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 LCA5Q86VQ0 697 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 SPATA18Q8TC71 538 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 SLC26A7Q8TE54 656 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 CXCL16Q9H2A7 254 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 PREBQ9HCU5 417 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 TSPAN16Q9UKR8 245 aa19.53■□□□□ 0.72
SNX4-201ENST00000251775 SMIM31A0A1B0GVY4 71 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 C2CD4BA6NLJ0 364 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 MCF2LO15068 1137 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 TSPAN1O60635 241 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 GRAP2O75791 330 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 GJA5P36382 358 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 CDH6P55285 790 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 SH3BGRP55822 239 aaPredicted RBP19.52■□□□□ 0.72
SNX4-201ENST00000251775 WASHC5Q12768 1159 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 USP4Q13107 963 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 TUBB3Q13509 450 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 OR6B2Q6IFH4 312 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 C12orf29Q8N999 325 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 GDPD5Q8WTR4 605 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 NMD3Q96D46 503 aaKnown RBP19.52■□□□□ 0.72
SNX4-201ENST00000251775 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNX4-201ENST00000251775 CLIC5Q9NZA1 410 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 ZNF180Q9UJW8 692 aa19.52■□□□□ 0.72
SNX4-201ENST00000251775 ATP9BO43861 1147 aa19.52■□□□□ 0.71
SNX4-201ENST00000251775 ASLP04424 464 aa19.52■□□□□ 0.71
SNX4-201ENST00000251775 XIAPP98170 497 aa19.52■□□□□ 0.71
SNX4-201ENST00000251775 BMPR2Q13873 1038 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms