RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PCSK1P29120 753 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 ADRA1BP35368 520 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 MSH2P43246 934 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 NR2C2P49116 596 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 PGFP49763 221 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 FAM47EQ6ZV65 393 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 BNIPLQ7Z465 357 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 RIBC1Q8N443 379 aaPredicted RBP15.22■□□□□ 0.03
MBD4-201ENST00000249910 PCSK9Q8NBP7 692 aaKnown RBP15.22■□□□□ 0.03
MBD4-201ENST00000249910 TFB1MQ8WVM0 346 aaKnown RBP15.22■□□□□ 0.03
MBD4-201ENST00000249910 CKAP2Q8WWK9 683 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 THOC1Q96FV9 657 aaKnown RBP15.22■□□□□ 0.03
MBD4-201ENST00000249910 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 CNGB3Q9NQW8 809 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 NUDT5Q9UKK9 219 aa15.22■□□□□ 0.03
MBD4-201ENST00000249910 BPTFQ12830 3046 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 CFAP69A5D8W1 941 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 CXorf49A8MYA2 514 aaPredicted RBP15.21■□□□□ 0.03
MBD4-201ENST00000249910 ALDH1A1P00352 501 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 LTFP02788 710 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 CKBP12277 381 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 OLIG2Q13516 323 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 SLC1A5Q15758 541 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 TRIM71Q2Q1W2 868 aaKnown RBP15.21■□□□□ 0.03
MBD4-201ENST00000249910 RAB41Q5JT25 222 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 BSPRYQ5W0U4 402 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 MICALCLQ6ZW33 695 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 ZNF534Q76KX8 674 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 RNF180Q86T96 592 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 CDKL3Q8IVW4 592 aaPredicted RBP15.21■□□□□ 0.03
MBD4-201ENST00000249910 CTAGE3PQ8IX95 158 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 DCAKDQ8WVC6 231 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 P2RY11Q96G91 374 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 OLFM3Q96PB7 478 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 SAMD15Q9P1V8 674 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
MBD4-201ENST00000249910 SLC24A2Q9UI40 661 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 NUP205Q92621 2012 aa15.21■□□□□ 0.03
MBD4-201ENST00000249910 EEF2KO00418 725 aaKnown RBP15.21■□□□□ 0.02
MBD4-201ENST00000249910 ZFXP17010 805 aaPredicted RBP15.21■□□□□ 0.02
MBD4-201ENST00000249910 NKX3-2P78367 333 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 TUSC3Q13454 348 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 ANKRD20A2Q5SQ80 823 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 ANKRD20A1Q5TYW2 823 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 ANKRD20A3Q5VUR7 823 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 OVOS1Q6IE37 1185 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 ADGRD1Q6QNK2 874 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 RFX8Q6ZV50 586 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 MICALL1Q8N3F8 863 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 CCDC197Q8NCU1 140 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 RSPH1Q8WYR4 309 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 QKIQ96PU8 341 aaKnown RBP eCLIP15.21■□□□□ 0.02
MBD4-201ENST00000249910 COLEC11Q9BWP8 271 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 ACTL7BQ9Y614 415 aa15.21■□□□□ 0.02
MBD4-201ENST00000249910 GCATO75600 419 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 DGKIO75912 1065 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 DDHD2O94830 711 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ERCC2P18074 760 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 MAP2K2P36507 400 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 DNAJC3Q13217 504 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 NOGQ13253 232 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 PTK7Q13308 1070 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
MBD4-201ENST00000249910 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
MBD4-201ENST00000249910 GLT1D1Q96MS3 346 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 CYTH2Q99418 400 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ACBD6Q9BR61 282 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 WDR91A4D1P6 747 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ZNF487B1APH4 448 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 SMAPO00193 183 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 UGT1A9O60656 530 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ASMTLO95671 621 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
MBD4-201ENST00000249910 RAB27AP51159 221 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 GRIK3Q13003 919 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 XRCC4Q13426 336 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 FAM171BQ6P995 826 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 TRMT10BQ6PF06 316 aaKnown RBP15.2■□□□□ 0.02
MBD4-201ENST00000249910 PACS2Q86VP3 889 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 UNC5BQ8IZJ1 945 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.2■□□□□ 0.02
MBD4-201ENST00000249910 PPM1NQ8N819 430 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 RAET1EQ8TD07 263 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 DENND1AQ8TEH3 1009 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 TKTL2Q9H0I9 626 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 UGT1A7Q9HAW7 530 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 UGT1A10Q9HAW8 530 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 UGT1A8Q9HAW9 530 aa15.2■□□□□ 0.02
MBD4-201ENST00000249910 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
MBD4-201ENST00000249910 ZNF638Q14966 1978 aaKnown RBP15.19■□□□□ 0.02
MBD4-201ENST00000249910 GOLGA6L7A0A1B0GV03 622 aa15.19■□□□□ 0.02
MBD4-201ENST00000249910 DNM1LO00429 736 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms