RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NDC80O14777 642 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 ADAM12O43184 909 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 TCEA3O75764 348 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 VNN2O95498 520 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 AGTP01019 485 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 MSS51Q4VC12 460 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 FNBP1LQ5T0N5 605 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 PSTKQ8IV42 348 aaKnown RBP24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 C7orf61Q8IZ16 206 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 ATAD1Q8NBU5 361 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 WDR83Q9BRX9 315 aaKnown RBP24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 CRISPLD1Q9H336 500 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 CXXC1Q9P0U4 656 aaPredicted RBP24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 CTNNAL1Q9UBT7 734 aa24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.18■■□□□ 1.46
SYNGR3-201ENST00000248121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 KCNN4O15554 427 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 SOAT2O75908 522 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 LTFP02788 710 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 ABHD2P08910 425 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 SYN1P17600 705 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 DEUP1Q05D60 604 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 IFRD2Q12894 506 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 MAPRE1Q15691 268 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 SPOUT1Q5T280 376 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 ZNF280DQ6N043 979 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 KCNT2Q6UVM3 1135 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 SLC7A14Q8TBB6 771 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 IGSF21Q96ID5 467 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 SERPINB12Q96P63 405 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 A6NNZ2 444 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 ZBBXA8MT70 800 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 TBC1D4O60343 1298 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 RPL17P18621 184 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 LSP1P33241 339 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 PDIA2Q13087 525 aaKnown RBP24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 HIF1AQ16665 826 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 ZSCAN26Q16670 478 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 TUBB8Q3ZCM7 444 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 PM20D1Q6GTS8 502 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 CCDC13Q8IYE1 715 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 ZBED8Q8IZ13 594 aa24.17■■□□□ 1.46
SYNGR3-201ENST00000248121 GREB1Q4ZG55 1949 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 CAPN9O14815 690 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 NCAM1P13591 858 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 GRIK1P39086 918 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 PGFP49763 221 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 BASP1P80723 227 aaKnown RBP24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 BTG3Q14201 252 aaPredicted RBP24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 C4orf50Q6ZRC1 276 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 CENPUQ71F23 418 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 RNF168Q8IYW5 571 aaPredicted RBP24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 CCDC33Q8N5R6 958 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 TTPALQ9BTX7 342 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 ARHGEF4Q9NR80 690 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 DTLQ9NZJ0 730 aa24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 RCOR3Q9P2K3 495 aaPredicted RBP24.16■■□□□ 1.46
SYNGR3-201ENST00000248121 ZFXP17010 805 aaPredicted RBP24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 KCNJ11Q14654 390 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 DDR2Q16832 855 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 SCN4BQ8IWT1 228 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 EDEM1Q92611 657 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 CFAP69A5D8W1 941 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 E7ESA3 106 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 C2CD2LO14523 706 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 ARL4AP40617 200 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 MMP13P45452 471 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 SLC5A3P53794 718 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 CCDC38Q502W7 563 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 FOXR1Q6PIV2 292 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 RNF19BQ6ZMZ0 732 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 DCP1BQ8IZD4 617 aaKnown RBP24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 MDM1Q8TC05 714 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 GPR152Q8TDT2 470 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 RNF139Q8WU17 664 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 PGAP3Q96FM1 320 aaPredicted RBP24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 PHACTR1Q9C0D0 580 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 RABEP2Q9H5N1 569 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 EURLQ9NYK6 297 aa24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 XPO7Q9UIA9 1087 aaKnown RBP24.15■■□□□ 1.46
SYNGR3-201ENST00000248121 PLXNA3P51805 1871 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 TNFRSF10BO14763 440 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 CPB1P15086 417 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 NR2C2P49116 596 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 XRCC4Q13426 336 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 TTC25Q96NG3 672 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 OLFM3Q96PB7 478 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 SLC9A7Q96T83 725 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 CDY1Q9Y6F8 540 aa24.14■■□□□ 1.46
SYNGR3-201ENST00000248121 MTMR11A4FU01 709 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 BAIAP3O94812 1187 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 ADRA1BP35368 520 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 GPX6P59796 221 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 MTM1Q13496 603 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 STAT4Q14765 748 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 SLC45A4Q5BKX6 768 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 EXOC3L1Q86VI1 746 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 ANKMY2Q8IV38 441 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 CYP4X1Q8N118 509 aa24.14■■□□□ 1.45
SYNGR3-201ENST00000248121 SLC39A11Q8N1S5 342 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms