RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 NOMO2Q5JPE7 1267 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 BSPRYQ5W0U4 402 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 COLGALT2Q8IYK4 626 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 NETO2Q8NC67 525 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 MGARPQ8TDB4 240 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 MRRFQ96E11 262 aaKnown RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 COLEC11Q9BWP8 271 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 PNPLA8Q9NP80 782 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 PSMC3IPQ9P2W1 217 aaPredicted RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 RRP15Q9Y3B9 282 aaKnown RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 SF3B1O75533 1304 aaKnown RBP eCLIP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 COL4A4P53420 1690 aaPredicted RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 ARHGEF37A1IGU5 675 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 PIAS1O75925 651 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 TSPY1Q01534 308 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 VPS52Q8N1B4 723 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 ANKRD42Q8N9B4 389 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 MCUQ8NE86 351 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 ZNF638Q14966 1978 aaKnown RBP19.1■□□□□ 0.65
HOXC11-201ENST00000243082 KBTBD13C9JR72 458 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 F9P00740 461 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 CXCR3P49682 368 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 YWHAHQ04917 246 aaPredicted RBP19.1■□□□□ 0.65
HOXC11-201ENST00000243082 PRKD1Q15139 912 aaPredicted RBP19.1■□□□□ 0.65
HOXC11-201ENST00000243082 KLHL38Q2WGJ6 581 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 ADGRD1Q6QNK2 874 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 CPLX4Q7Z7G2 160 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 SLAIN1Q8ND83 568 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 SCAMP5Q8TAC9 235 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 TBC1D13Q9NVG8 400 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 NLRC5Q86WI3 1866 aa19.1■□□□□ 0.65
HOXC11-201ENST00000243082 PTPRDP23468 1912 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 ATP2A2P16615 1042 aaKnown RBP19.09■□□□□ 0.65
HOXC11-201ENST00000243082 TPSB2P20231 275 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 TPSAB1Q15661 275 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 ANKRD20A2Q5SQ80 823 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 ANKRD20A1Q5TYW2 823 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 ANKRD20A3Q5VUR7 823 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 ZNF534Q76KX8 674 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 LRRC34Q8IZ02 419 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 PAFAH2Q99487 392 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 MLXIPLQ9NP71 852 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 PHF24Q9UPV7 400 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 FAM169AQ9Y6X4 670 aa19.09■□□□□ 0.65
HOXC11-201ENST00000243082 A0A0A0MRY4 1105 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 TMEM189-UBE2V1I3L0A0 370 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 ERCC2P18074 760 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 KRT15P19012 456 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 GRK4P32298 578 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 MAGEA3P43357 314 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 HCAR3P49019 387 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 GLUD2P49448 558 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 SEMA5AQ13591 1074 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 ARHGEF18Q6ZSZ5 1173 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 LRRC8DQ7L1W4 858 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 TAC4Q86UU9 113 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 SPATS2Q86XZ4 545 aaKnown RBP19.08■□□□□ 0.65
HOXC11-201ENST00000243082 TP53INP2Q8IXH6 220 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 URGCPQ8TCY9 931 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 SPATA13Q96N96 652 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 TRABDQ9H4I3 376 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 WDCPQ9H6R7 721 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 KIF9Q9HAQ2 790 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 DNAJB4Q9UDY4 337 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 GGA2Q9UJY4 613 aa19.08■□□□□ 0.65
HOXC11-201ENST00000243082 TCRBV9S1A1TA0A576 114 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 TNFRSF10BO14763 440 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 OR4Q2P0C623 313 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 GPNMBQ14956 572 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 PDK1Q15118 436 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 ARL13BQ3SXY8 428 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 SPATA2LQ8IUW3 424 aaPredicted RBP19.08■□□□□ 0.64
HOXC11-201ENST00000243082 DCAKDQ8WVC6 231 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 P2RY11Q96G91 374 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 SEC16BQ96JE7 1060 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 FTHL17Q9BXU8 183 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 PRDM12Q9H4Q4 367 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 SENP1Q9P0U3 644 aa19.08■□□□□ 0.64
HOXC11-201ENST00000243082 A0A1W2PPM1 405 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 ANKRD65E5RJM6 399 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 OAZ2O95190 189 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 SELPP16109 830 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 MAP2K2P36507 400 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 OR1G1P47890 313 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 CDK7P50613 346 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 YWHAGP61981 247 aaKnown RBP eCLIP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 AP1B1Q10567 949 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 C6orf89Q6UWU4 347 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 C4orf50Q6ZRC1 276 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 BEND5Q7L4P6 421 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 DQX1Q8TE96 717 aaKnown RBP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 DYDC1Q8WWB3 177 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 CKAP2Q8WWK9 683 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 CYTH2Q99418 400 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 TKTL2Q9H0I9 626 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 PLAC1Q9HBJ0 212 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 KANSL3Q9P2N6 904 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 FAM47DPA6NHR8 397 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms