RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 HCAR3P49019 387 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 HDAC4P56524 1084 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 KRT81Q14533 505 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 SLMAPQ14BN4 828 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 ARL13BQ3SXY8 428 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 TRNP1Q6NT89 227 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.221e-12■■□□□ 11.5
SLIRP-201ENST00000238688 ZMIZ2Q8NF64 920 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 RNF25Q96BH1 459 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 SNF8Q96H20 258 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 CFAP57Q96MR6 1250 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 FMO2Q99518 471 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 MAN1C1Q9NR34 630 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 GREB1Q4ZG55 1949 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CLDN5O00501 218 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CAPN9O14815 690 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 MCF2LO15068 1137 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 RTN3O95197 1032 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ADH1AP07327 375 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 RPL17P18621 184 aaKnown RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 GJC1P36383 396 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ARL4AP40617 200 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CDH6P55285 790 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CREMQ03060 361 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 GPR17Q13304 367 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 XRCC4Q13426 336 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 DPYSL3Q14195 570 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 OASLQ15646 514 aaKnown RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 HSP90B2PQ58FF3 399 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 SLC9A4Q6AI14 798 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 AADACL2Q6P093 401 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 TTC27Q6P3X3 843 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 CYP4V2Q6ZWL3 525 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 PCGF5Q86SE9 256 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ZDHHC14Q8IZN3 488 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 HASPINQ8TF76 798 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 IFT81Q8WYA0 676 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ZNF707Q96C28 371 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 PIWIL1Q96J94 861 aaKnown RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 RNF157Q96PX1 679 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ULBP1Q9BZM6 244 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 ABCC13Q9NSE7 274 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
SLIRP-201ENST00000238688 TIMM13Q9Y5L4 95 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-201ENST00000238688 TCRBV7S2A1N4TA0A589 114 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 FAM92AA1XBS5 289 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 TGM5O43548 720 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CST8O60676 142 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 RFPL2O75678 378 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 BEST1O76090 585 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 C1RP00736 705 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 PDGFBP01127 241 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ASGR2P07307 311 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 TCF4P15884 667 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 BDNFP23560 247 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 SULT1E1P49888 294 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 RPL10AP62906 217 aaKnown RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 FAM193AP78312 1265 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ATP11AP98196 1134 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 C15orf59Q2T9L4 293 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CTXN3Q4LDR2 81 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 DCAF6Q58WW2 860 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 EFHC2Q5JST6 749 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 IER5LQ5T953 404 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 FAM171A1Q5VUB5 890 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 LRIG3Q6UXM1 1119 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 SPATA31D4Q6ZUB0 917 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms