RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 CNGB3Q9NQW8 809 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 MAN1C1Q9NR34 630 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 QPCTLQ9NXS2 382 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 ADAM22Q9P0K1 906 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 DNAJB4Q9UDY4 337 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 CDC23Q9UJX2 597 aa9.71□□□□□ -0.86
TGFB3-201ENST00000238682 EFCAB8A8MWE9 144 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 M0QYV0 167 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PER2O15055 1255 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 DKK1O94907 266 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 EZRP15311 586 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 CD46P15529 392 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PFKLP17858 780 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PPP3CCP48454 512 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 TUFMP49411 452 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PSMD7P51665 324 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PDCLQ13371 301 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 KRT72Q14CN4 511 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SWI5Q1ZZU3 235 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 CTXN3Q4LDR2 81 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 RAB41Q5JT25 222 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 ACOT1Q86TX2 421 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 FAM35AQ86V20 835 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SPATA2LQ8IUW3 424 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 KREMEN2Q8NCW0 462 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SHDQ96IW2 340 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SMAD5Q99717 465 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 TUBA8Q9NY65 449 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 TCRBV5S1A1TA0A578 114 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 A6NCN8 305 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 A6NJY4 79 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SIGLEC16A6NMB1 481 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 C2CD4DB7Z1M9 353 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 KRT38O76015 456 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 BRCC3P46736 316 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 CLNS1AP54105 237 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 MLLT6P55198 1093 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PIGHQ14442 188 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 FAM171A1Q5VUB5 890 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 ARHGAP22Q7Z5H3 698 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 DDX42Q86XP3 938 aaKnown RBP eCLIP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 B4GALNT2Q8NHY0 566 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 JPH3Q8WXH2 748 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 PPP1R14BQ96C90 147 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 RPGRIP1Q96KN7 1286 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 FBXO44Q9H4M3 255 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 SEPT11Q9NVA2 429 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 RNF14Q9UBS8 474 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 AFF4Q9UHB7 1163 aaKnown RBP9.7□□□□□ -0.86
TGFB3-201ENST00000238682 IP6K2Q9UHH9 426 aa9.7□□□□□ -0.86
TGFB3-201ENST00000238682 KMT2EQ8IZD2 1858 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 ANHXE9PGG2 379 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 ATP1A1P05023 1023 aaKnown RBP9.69□□□□□ -0.86
TGFB3-201ENST00000238682 EPCAMP16422 314 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 PFKPQ01813 784 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
TGFB3-201ENST00000238682 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
TGFB3-201ENST00000238682 LRRC38Q5VT99 294 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 NAA35Q5VZE5 725 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 DENND1BQ6P3S1 775 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 VSIG1Q86XK7 387 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 FUKQ8N0W3 1084 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 ZNF653Q96CK0 615 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 ZSWIM1Q9BR11 485 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 CRTAC1Q9NQ79 661 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 IL37Q9NZH6 218 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 PTPRDP23468 1912 aa9.69□□□□□ -0.86
TGFB3-201ENST00000238682 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 A6NNZ2 444 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
TGFB3-201ENST00000238682 TEX28O15482 410 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 CEP104O60308 925 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 B4GALT3O60512 393 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 SRGAP2O75044 1071 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 ZNF189O75820 626 aaPredicted RBP9.68□□□□□ -0.86
TGFB3-201ENST00000238682 SRFP11831 508 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 TKTP29401 623 aaKnown RBP9.68□□□□□ -0.86
TGFB3-201ENST00000238682 SLC8A1P32418 973 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 CA8P35219 290 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 ZNF135P52742 658 aaPredicted RBP9.68□□□□□ -0.86
TGFB3-201ENST00000238682 AIF1P55008 147 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 PRKCQQ04759 706 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 PSMD5Q16401 504 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 TUBB8Q3ZCM7 444 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 SLC26A9Q7LBE3 791 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 PDZD8Q8NEN9 1154 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 KHSRPQ92945 711 aaKnown RBP eCLIP9.68□□□□□ -0.86
TGFB3-201ENST00000238682 PAAF1Q9BRP4 392 aa9.68□□□□□ -0.86
TGFB3-201ENST00000238682 CNOT8Q9UFF9 292 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms