RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SLC26A3P40879 764 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 IL5RAQ01344 420 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 BMPR2Q13873 1038 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 CHSY1Q86X52 802 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 GREM2Q9H772 168 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 PTBP2Q9UKA9 531 aaKnown RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 CHRNB3Q05901 458 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 SCARF1Q14162 830 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 PIGHQ14442 188 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 COG2Q14746 738 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 RALGPS1Q5JS13 557 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ZNF804AQ7Z570 1209 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 FAM71DQ8N9W8 422 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 USP29Q9HBJ7 922 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 OTUD3Q5T2D3 398 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 BORAQ6PGQ7 559 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ING4Q9UNL4 249 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 MYOM1P52179 1685 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 GTF2IP78347 998 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 QPRTQ15274 297 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 PTCD3Q96EY7 689 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 PWWP2AQ96N64 755 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 CRNNQ9UBG3 495 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 IFT52Q9Y366 437 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 UGT2B4P06133 528 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 CDH1P12830 882 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 RAB25P57735 213 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 MOGSQ13724 837 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 TLE6Q9H808 572 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 NOL11Q9H8H0 719 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 RAPGEFL1Q9UHV5 662 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 TTLL3Q9Y4R7 772 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 NMT2O60551 498 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 HLA-DPA1P20036 260 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 BCAR1P56945 870 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 OR2B6P58173 313 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 EPHA7Q15375 998 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 SYCE2Q6PIF2 218 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 VPS39Q96JC1 886 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 ZSCAN5AQ9BUG6 496 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 ACSS3Q9H6R3 686 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 BAIAP2Q9UQB8 552 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 GNB5O14775 395 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 ALOX15BO15296 676 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 ANGPT1Q15389 498 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 BTN2A1Q7KYR7 527 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 CIB1Q99828 191 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 UQCC2Q9BRT2 126 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 TRMT13Q9NUP7 481 aaKnown RBP13.19□□□□□ -0.3
VAMP4-201ENST00000236192 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
VAMP4-201ENST00000236192 EIF3DO15371 548 aaKnown RBP eCLIP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 RGS20O76081 388 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ETFBP38117 255 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ARL4AP40617 200 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ELK3P41970 407 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PUDPQ08623 228 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PKN1Q16512 942 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PUS10Q3MIT2 529 aaKnown RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 IQSEC1Q6DN90 963 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM270Q6UE05 265 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 FAR1Q8WVX9 515 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 DMRTB1Q96MA1 342 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM121Q9BTD3 319 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PSME2Q9UL46 239 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 E7ENX8 843 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 CST8O60676 142 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms