RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 RAET1EQ8TD07 263 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 ELAC2Q9BQ52 826 aaKnown RBP14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 RGS18Q9NS28 235 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 FETUBQ9UGM5 382 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 FBXW11Q9UKB1 542 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 KLHL38Q2WGJ6 581 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 DEFB115Q30KQ5 88 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 KBTBD12Q3ZCT8 623 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 CLLU1OSQ5K130 101 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 ANKRD20A2Q5SQ80 823 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 ANKRD20A1Q5TYW2 823 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 ANKRD20A3Q5VUR7 823 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 LHX8Q68G74 356 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 DENND5BQ6ZUT9 1274 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 MZB1Q8WU39 189 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 CABS1Q96KC9 395 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 SUSD3Q96L08 255 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.9□□□□□ -0.028e-9■■□□□ 13.3
PRKAB1-201ENST00000229328 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
PRKAB1-201ENST00000229328 DCLK1O15075 740 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 C1QAP02745 245 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 SKIP12755 728 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 TSHRP16473 764 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 STX2P32856 288 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 RPA3P35244 121 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 AP1B1Q10567 949 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 SEMA3BQ13214 749 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 MICALCLQ6ZW33 695 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 DENND1AQ8TEH3 1009 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 NTAN1Q96AB6 310 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 P2RY11Q96G91 374 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 UROC1Q96N76 676 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 SLC9A7Q96T83 725 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PPCSQ9HAB8 311 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 DMAP1Q9NPF5 467 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 FGFR1OP2Q9NVK5 253 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 A0A1W2PQ45 241 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 A0A1W2PQY0 241 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 OR4Q2P0C623 313 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 FOXN2P32314 431 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 MSH2P43246 934 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 CBLBQ13191 982 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PAFAH1B3Q15102 231 aaKnown RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PRKD1Q15139 912 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 RNF187Q5TA31 235 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 BSPRYQ5W0U4 402 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PGAP3Q96FM1 320 aaPredicted RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 SMC6Q96SB8 1091 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 CYTH2Q99418 400 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 PRDM12Q9H4Q4 367 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 DSEQ9UL01 958 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 SQORQ9Y6N5 450 aa14.89□□□□□ -0.03
PRKAB1-201ENST00000229328 A0A0A0MRY4 1105 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 HACD1B0YJ81 288 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 INPPL1O15357 1258 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 PRPF4O43172 522 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 TYROBPO43914 113 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 TOMM70O94826 608 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 ASMTLO95671 621 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 ATP2A2P16615 1042 aaKnown RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 ERCC2P18074 760 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 KRT4P19013 534 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 MAGEA3P43357 314 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 PGFP49763 221 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SCAPQ12770 1279 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SEMA5AQ13591 1074 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 TAC4Q86UU9 113 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 CCNYQ8ND76 341 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 MCUQ8NE86 351 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SPATA13Q96N96 652 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 KLF6Q99612 283 aaPredicted RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SEPT10Q9P0V9 454 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 ZC3H7BQ9UGR2 993 aaKnown RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 GRID1Q9ULK0 1009 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 FRMPD3Q5JV73 1810 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 MOXD2PA6NHM9 499 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 RNF103O00237 685 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 KIAA0754O94854 1291 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 INHAP05111 366 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 HOXD10P28358 340 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 NUGGCQ68CJ6 796 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 C4orf22Q6V702 233 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SLC24A5Q71RS6 500 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 COLGALT1Q8NBJ5 622 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 SIGLEC10Q96LC7 697 aa14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 TGS1Q96RS0 853 aaKnown RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 ATXN2Q99700 1313 aaKnown RBP14.88□□□□□ -0.03
PRKAB1-201ENST00000229328 CXorf49A8MYA2 514 aaPredicted RBP14.87□□□□□ -0.03
PRKAB1-201ENST00000229328 GOLGA8RI6L899 631 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms